Protein : Qrob_P0265740.2 Q. robur

Protein Identifier  ? Qrob_P0265740.2 Organism . Name  Quercus robur
Score  29.1 Score Type  egn
Protein Description  (M=3) 1.1.2.4 - D-lactate dehydrogenase (cytochrome). Code Enzyme  EC:1.1.2.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 157  

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0422880 1 156 + 156 Gaps:15 25.41 555 68.09 7e-53 d-lactate dehydrogenase putative (EC:1.1.2.4)
blastp_kegg lcl|vvi:100242784 1 156 + 156 Gaps:4 26.86 566 63.16 6e-51 D-lactate dehydrogenase [cytochrome] mitochondrial-like
blastp_kegg lcl|cit:102617204 3 156 + 154 Gaps:11 27.10 572 63.87 1e-48 D-lactate dehydrogenase [cytochrome] mitochondrial-like
blastp_kegg lcl|pmum:103339581 1 156 + 156 Gaps:22 25.81 558 68.06 6e-48 D-lactate dehydrogenase [cytochrome] mitochondrial-like
blastp_kegg lcl|tcc:TCM_025063 1 156 + 156 Gaps:12 28.12 576 58.64 1e-47 FAD-linked oxidases family protein isoform 1
blastp_kegg lcl|pop:POPTR_0016s06480g 1 156 + 156 Gaps:16 27.07 569 63.64 1e-47 POPTRDRAFT_256110 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003803mg 1 156 + 156 Gaps:22 26.28 548 66.67 3e-47 hypothetical protein
blastp_kegg lcl|pmum:103339579 1 156 + 156 Gaps:22 25.81 558 66.67 2e-46 D-lactate dehydrogenase [cytochrome] mitochondrial-like
blastp_kegg lcl|pxb:103968083 1 156 + 156 Gaps:19 75.52 192 57.93 5e-46 D-lactate dehydrogenase [cytochrome] mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa003656mg 1 156 + 156 Gaps:22 25.76 559 65.97 1e-45 hypothetical protein
blastp_uniprot_sprot sp|Q94AX4|DLD_ARATH 59 156 + 98 Gaps:2 17.28 567 60.20 8e-28 D-lactate dehydrogenase [cytochrome] mitochondrial OS Arabidopsis thaliana GN DLD PE 1 SV 1
rpsblast_cdd gnl|CDD|178402 9 156 + 148 Gaps:7 25.41 555 61.70 2e-45 PLN02805 PLN02805 D-lactate dehydrogenase [cytochrome].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 70 156 87 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 51 51 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 100 156 57 G3DSA:3.30.43.10 none none IPR016167
Phobius 64 69 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 52 63 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 69 69 SIGNAL_PEPTIDE none Signal peptide region none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting