Protein : Qrob_P0257770.2 Q. robur
Protein Identifier  ? Qrob_P0257770.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) 5.3.1.6 - Ribose-5-phosphate isomerase. Code Enzyme  EC:5.3.1.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 201  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0004751 ribose-5-phosphate isomerase activity Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO:0009052 pentose-phosphate shunt, non-oxidative branch The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|smo:SELMODRAFT_448303 12 165 + 154 Gaps:8 58.91 275 59.88 9e-60 hypothetical protein
blastp_kegg lcl|smo:SELMODRAFT_441314 12 165 + 154 Gaps:8 58.91 275 59.26 6e-59 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_224305 12 165 + 154 Gaps:8 71.68 226 59.88 1e-58 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_145803 12 165 + 154 Gaps:8 51.27 316 59.88 3e-58 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03820g 12 165 + 154 Gaps:8 32.46 499 61.11 5e-56 POPTRDRAFT_560392 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03810g 16 165 + 150 Gaps:12 79.41 204 60.49 3e-53 hypothetical protein
blastp_kegg lcl|thn:NK55_03395 12 165 + 154 Gaps:7 68.51 235 50.31 7e-45 rpiA ribose-5-phosphate isomerase A RpiA (EC:5.3.1.6)
blastp_kegg lcl|tel:tll1273 12 165 + 154 Gaps:7 68.22 236 49.69 3e-44 rpiA ribose-5-phosphate isomerase A (EC:5.3.1.6)
blastp_kegg lcl|cyn:Cyan7425_4885 12 165 + 154 Gaps:7 67.93 237 49.07 4e-44 ribose-5-phosphate isomerase A
blastp_kegg lcl|atr:s00095p00013730 12 122 + 111 none 44.40 250 68.47 3e-43 AMTR_s00095p00013730 hypothetical protein
blastp_pdb 1m0s_B 18 165 + 148 Gaps:1 68.04 219 43.62 2e-30 mol:protein length:219 Ribose-5-Phosphate Isomerase A
blastp_pdb 1m0s_A 18 165 + 148 Gaps:1 68.04 219 43.62 2e-30 mol:protein length:219 Ribose-5-Phosphate Isomerase A
blastp_pdb 1lk7_D 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_C 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_B 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_A 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_D 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_C 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_B 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk5_A 12 165 + 154 Gaps:7 70.31 229 39.75 1e-29 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_uniprot_sprot sp|Q8DJF2|RPIA_THEEB 12 165 + 154 Gaps:7 68.22 236 49.69 1e-45 Ribose-5-phosphate isomerase A OS Thermosynechococcus elongatus (strain BP-1) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B8HN58|RPIA_CYAP4 12 165 + 154 Gaps:7 67.93 237 49.07 1e-45 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B7K6D3|RPIA_CYAP8 13 165 + 153 Gaps:7 67.51 237 48.12 1e-42 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 8801) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B1XL11|RPIA_SYNP2 12 165 + 154 Gaps:7 69.10 233 45.96 8e-41 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q55766|RPIA_SYNY3 12 165 + 154 Gaps:7 68.51 235 43.48 6e-40 Ribose-5-phosphate isomerase A OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q111U2|RPIA_TRIEI 12 165 + 154 Gaps:7 67.93 237 44.10 1e-39 Ribose-5-phosphate isomerase A OS Trichodesmium erythraeum (strain IMS101) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q8YYG2|RPIA_NOSS1 12 165 + 154 Gaps:7 68.22 236 46.58 2e-39 Ribose-5-phosphate isomerase A OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q3M4J7|RPIA_ANAVT 12 165 + 154 Gaps:7 68.22 236 46.58 2e-39 Ribose-5-phosphate isomerase A OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B7KIR2|RPIA_CYAP7 12 165 + 154 Gaps:7 67.93 237 42.86 3e-37 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 7424) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q5N3J1|RPIA_SYNP6 12 165 + 154 Gaps:7 69.40 232 45.34 4e-36 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN rpiA PE 3 SV 2

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 198 200 3 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 97 165 69 SSF75445 none none none
Pfam 16 165 150 PF06026 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788
Phobius 176 197 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 110 165 56 G3DSA:3.30.70.260 none none none
Gene3D 12 109 98 G3DSA:3.40.50.1360 none none none
PANTHER 13 165 153 PTHR11934 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115";signature_desc=RIBOSE-5-PHOSPHATE ISOMERASE none IPR004788
PANTHER 13 165 153 PTHR11934:SF0 none none none
SUPERFAMILY 13 115 103 SSF100950 none none none
Phobius 1 175 175 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting