Protein : Qrob_P0257670.2 Q. robur
Protein Identifier  ? Qrob_P0257670.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) 5.3.1.6 - Ribose-5-phosphate isomerase. Code Enzyme  EC:5.3.1.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 143  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0004751 ribose-5-phosphate isomerase activity Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO:0009052 pentose-phosphate shunt, non-oxidative branch The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|smo:SELMODRAFT_448303 12 122 + 111 Gaps:27 50.18 275 49.28 1e-34 hypothetical protein
blastp_kegg lcl|smo:SELMODRAFT_441314 12 122 + 111 Gaps:27 50.18 275 49.28 1e-34 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_145803 12 122 + 111 Gaps:27 43.67 316 49.28 2e-32 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03810g 40 122 + 83 none 40.69 204 71.08 8e-32 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s03820g 12 122 + 111 Gaps:29 27.66 499 47.83 5e-31 POPTRDRAFT_560392 hypothetical protein
blastp_kegg lcl|ppp:PHYPADRAFT_224305 12 122 + 111 Gaps:27 61.06 226 47.10 9e-31 hypothetical protein
blastp_kegg lcl|atr:s00095p00013730 12 95 + 84 Gaps:27 44.40 250 49.55 1e-22 AMTR_s00095p00013730 hypothetical protein
blastp_kegg lcl|amr:AM1_2415 13 122 + 110 Gaps:27 58.30 235 39.42 2e-22 rpiA ribose-5-phosphate isomerase A
blastp_kegg lcl|calo:Cal7507_1861 12 122 + 111 Gaps:27 58.47 236 39.86 2e-22 ribose-5-phosphate isomerase (EC:5.3.1.6)
blastp_kegg lcl|cyn:Cyan7425_4885 12 125 + 114 Gaps:27 59.49 237 38.30 1e-21 ribose-5-phosphate isomerase A
blastp_pdb 3ixq_D 37 120 + 84 none 37.17 226 47.62 2e-15 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_C 37 120 + 84 none 37.17 226 47.62 2e-15 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_B 37 120 + 84 none 37.17 226 47.62 2e-15 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 3ixq_A 37 120 + 84 none 37.17 226 47.62 2e-15 mol:protein length:226 Ribose-5-phosphate isomerase A
blastp_pdb 1o8b_B 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 RIBOSE 5-PHOSPHATE ISOMERASE
blastp_pdb 1o8b_A 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 RIBOSE 5-PHOSPHATE ISOMERASE
blastp_pdb 1lkz_B 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 Ribose 5-phosphate isomerase A
blastp_pdb 1lkz_A 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 Ribose 5-phosphate isomerase A
blastp_pdb 1ks2_B 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 protein EC1268 RPIA
blastp_pdb 1ks2_A 22 120 + 99 Gaps:14 38.81 219 49.41 2e-13 mol:protein length:219 protein EC1268 RPIA
blastp_uniprot_sprot sp|B8HN58|RPIA_CYAP4 12 125 + 114 Gaps:27 59.49 237 38.30 4e-23 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q8DJF2|RPIA_THEEB 12 122 + 111 Gaps:27 58.47 236 37.68 8e-23 Ribose-5-phosphate isomerase A OS Thermosynechococcus elongatus (strain BP-1) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B7K6D3|RPIA_CYAP8 13 122 + 110 Gaps:27 57.81 237 37.96 1e-21 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 8801) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B1XL11|RPIA_SYNP2 12 122 + 111 Gaps:27 59.23 233 34.78 3e-20 Ribose-5-phosphate isomerase A OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q3M4J7|RPIA_ANAVT 12 122 + 111 Gaps:27 58.47 236 36.23 8e-20 Ribose-5-phosphate isomerase A OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q8YYG2|RPIA_NOSS1 12 122 + 111 Gaps:27 58.47 236 36.23 1e-19 Ribose-5-phosphate isomerase A OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q55766|RPIA_SYNY3 12 126 + 115 Gaps:27 60.43 235 32.39 3e-19 Ribose-5-phosphate isomerase A OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q111U2|RPIA_TRIEI 12 122 + 111 Gaps:27 58.23 237 33.33 2e-18 Ribose-5-phosphate isomerase A OS Trichodesmium erythraeum (strain IMS101) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|B7KIR2|RPIA_CYAP7 12 122 + 111 Gaps:27 58.23 237 33.33 4e-18 Ribose-5-phosphate isomerase A OS Cyanothece sp. (strain PCC 7424) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q8TQ69|RPIA_METAC 15 125 + 111 Gaps:29 58.12 234 36.03 5e-18 Ribose-5-phosphate isomerase A OS Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN rpiA PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 36 122 87 PF06026 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788
Gene3D 77 121 45 G3DSA:3.30.70.260 none none none
PANTHER 37 121 85 PTHR11934 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115";signature_desc=RIBOSE-5-PHOSPHATE ISOMERASE none IPR004788
Gene3D 29 76 48 G3DSA:3.40.50.1360 none none none
PANTHER 37 121 85 PTHR11934:SF0 none none none
SUPERFAMILY 70 125 56 SSF75445 none none none
SUPERFAMILY 30 88 59 SSF100950 none none none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting