Protein : Qrob_P0255850.2 Q. robur
Protein Identifier  ? Qrob_P0255850.2 Organism . Name  Quercus robur
Score  1.0 Score Type  egn
Protein Description  (M=1) KOG0917 - Uncharacterized conserved protein [Function unknown]. Code Enzyme  EC:2.4.1.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1846  
Kegg Orthology  K11000
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003843 1,3-beta-D-glucan synthase activity Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).
GO:0000148 1,3-beta-D-glucan synthase complex A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.
GO:0006075 (1->3)-beta-D-glucan biosynthetic process The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103405629 8 1845 + 1838 Gaps:84 99.27 1922 83.75 0.0 callose synthase 5-like
blastp_kegg lcl|pxb:103963152 8 1845 + 1838 Gaps:84 99.27 1922 83.44 0.0 callose synthase 5
blastp_kegg lcl|csv:101228937 8 1845 + 1838 Gaps:84 99.58 1916 83.86 0.0 callose synthase 5-like
blastp_kegg lcl|pmum:103327153 8 1845 + 1838 Gaps:110 98.55 1934 83.53 0.0 callose synthase 5
blastp_kegg lcl|cmo:103499639 8 1845 + 1838 Gaps:114 99.59 1946 83.08 0.0 callose synthase 5-like
blastp_kegg lcl|vvi:100248918 8 1845 + 1838 Gaps:86 99.58 1918 83.66 0.0 callose synthase 5-like
blastp_kegg lcl|pper:PRUPE_ppa000071mg 8 1845 + 1838 Gaps:124 99.44 1965 81.53 0.0 hypothetical protein
blastp_kegg lcl|cmo:103499636 8 1843 + 1836 Gaps:82 99.53 1913 82.30 0.0 callose synthase 5-like
blastp_kegg lcl|tcc:TCM_001476 2 1844 + 1843 Gaps:103 98.82 1949 81.78 0.0 Callose synthase 5
blastp_kegg lcl|fve:101295280 8 1845 + 1838 Gaps:82 99.37 1918 81.11 0.0 callose synthase 5-like
blastp_uniprot_sprot sp|Q3B724|CALS5_ARATH 8 1845 + 1838 Gaps:87 99.38 1923 80.27 0.0 Callose synthase 5 OS Arabidopsis thaliana GN CALS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LXT9|CALS3_ARATH 5 1845 + 1841 Gaps:128 99.18 1955 60.50 0.0 Callose synthase 3 OS Arabidopsis thaliana GN CALS3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9AUE0|CALS1_ARATH 12 1845 + 1834 Gaps:123 99.03 1950 59.71 0.0 Callose synthase 1 OS Arabidopsis thaliana GN CALS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SL03|CALS2_ARATH 12 1845 + 1834 Gaps:143 99.03 1950 59.55 0.0 Callose synthase 2 OS Arabidopsis thaliana GN CALS2 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LYS6|CALS6_ARATH 8 1842 + 1835 Gaps:150 98.96 1921 54.50 0.0 Putative callose synthase 6 OS Arabidopsis thaliana GN CALS6 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SHJ3|CALS7_ARATH 8 1845 + 1838 Gaps:148 97.34 1958 55.14 0.0 Callose synthase 7 OS Arabidopsis thaliana GN CALS7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9LUD7|CALS8_ARATH 4 1845 + 1842 Gaps:166 98.89 1976 51.74 0.0 Putative callose synthase 8 OS Arabidopsis thaliana GN CALS8 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LTG5|CALS4_ARATH 13 1845 + 1833 Gaps:224 99.57 1871 51.96 0.0 Callose synthase 4 OS Arabidopsis thaliana GN CALS4 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SJM0|CALSA_ARATH 33 1844 + 1812 Gaps:209 97.85 1904 47.50 0.0 Callose synthase 10 OS Arabidopsis thaliana GN CALS10 PE 2 SV 5
blastp_uniprot_sprot sp|Q9SFU6|CALS9_ARATH 33 1844 + 1812 Gaps:190 97.99 1890 47.73 0.0 Callose synthase 9 OS Arabidopsis thaliana GN CALS9 PE 2 SV 2
rpsblast_cdd gnl|CDD|202219 985 1754 + 770 Gaps:107 99.63 818 32.02 0.0 pfam02364 Glucan_synthase 1 3-beta-glucan synthase component. This family consists of various 1 3-beta-glucan synthase components including Gls1 Gls2 and Gls3 from yeast. 1 3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1 3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1 3)-beta-D-glucosyl}(N) < > UDP + {(1 3)-beta-D-glucosyl}(N+1).
rpsblast_cdd gnl|CDD|206456 321 437 + 117 Gaps:6 100.00 113 49.56 1e-50 pfam14288 FKS1_dom1 1 3-beta-glucan synthase subunit FKS1 domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1 3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase pfam02364.
rpsblast_cdd gnl|CDD|191053 38 152 + 115 Gaps:11 36.19 315 33.33 6e-11 pfam04652 DUF605 Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region.
rpsblast_kog gnl|CDD|36134 5 1845 + 1841 Gaps:263 99.82 1679 54.12 0.0 KOG0916 KOG0916 KOG0916 1 3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis].
rpsblast_kog gnl|CDD|36135 34 152 + 119 Gaps:13 34.91 338 32.20 6e-10 KOG0917 KOG0917 KOG0917 Uncharacterized conserved protein [Function unknown].

34 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1500 1577 78 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 3 1845 1843 PTHR12741:SF6 none none none
Phobius 1 483 483 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 3 1845 1843 PTHR12741 none none none
Phobius 697 715 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 595 620 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 716 1433 718 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 692 696 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1477 1499 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 39 157 119 PF04652 none Vta1 like none
Gene3D 38 167 130 G3DSA:1.25.40.270 none none IPR023175
Phobius 1578 1595 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1815 1845 31 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1722 1747 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1458 1476 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1794 1814 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 484 500 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1434 1457 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1774 1793 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1753 1773 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 555 575 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 520 543 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1596 1600 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 321 436 116 PF14288 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase subunit FKS1, domain-1 IPR026899
Phobius 621 673 53 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 501 519 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 576 594 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 985 1714 730 PF02364 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase component IPR003440
Phobius 1748 1752 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1623 1721 99 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

11 Localization

Analysis Start End Length
TMHMM 1724 1746 22
TMHMM 678 700 22
TMHMM 598 620 22
TMHMM 1429 1451 22
TMHMM 551 573 22
TMHMM 1599 1621 22
TMHMM 483 500 17
TMHMM 1753 1773 20
TMHMM 1515 1532 17
TMHMM 1793 1815 22
TMHMM 1478 1500 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 64   Mitochondrion 3 0.025 0.780 NON-PLANT 64