Protein : Qrob_P0253880.2 Q. robur

Protein Identifier  ? Qrob_P0253880.2 Organism . Name  Quercus robur
Score  81.1 Score Type  egn
Protein Description  (M=1) 1.4.7.1 - Glutamate synthase (ferredoxin). Code Enzyme  EC:1.4.7.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 245  

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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006537 glutamate biosynthetic process The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid.
GO:0015930 glutamate synthase activity Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors.
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0502090 1 218 + 218 Gaps:65 14.22 1632 64.22 9e-55 glutamate synthase putative (EC:1.4.7.1)
blastp_kegg lcl|vvi:100233082 1 218 + 218 Gaps:56 12.95 1629 65.88 2e-54 glutamate synthase (ferredoxin)
blastp_kegg lcl|cic:CICLE_v10004137mg 1 218 + 218 Gaps:67 16.66 1585 56.82 6e-54 hypothetical protein
blastp_kegg lcl|cit:102609089 1 218 + 218 Gaps:67 16.29 1621 56.82 6e-54 ferredoxin-dependent glutamate synthase 1 chloroplastic/mitochondrial-like
blastp_kegg lcl|sot:102600112 1 218 + 218 Gaps:65 14.25 1621 62.77 7e-54 ferredoxin-dependent glutamate synthase 1 chloroplastic/mitochondrial-like
blastp_kegg lcl|sly:101246028 1 218 + 218 Gaps:65 14.25 1621 62.34 4e-53 ferredoxin-dependent glutamate synthase 1 chloroplastic-like
blastp_kegg lcl|fve:101314871 1 218 + 218 Gaps:65 14.40 1611 62.07 4e-52 ferredoxin-dependent glutamate synthase 1 chloroplastic-like
blastp_kegg lcl|pmum:103341391 1 218 + 218 Gaps:56 12.98 1625 64.45 1e-51 ferredoxin-dependent glutamate synthase chloroplastic
blastp_kegg lcl|brp:103847326 1 218 + 218 Gaps:56 13.02 1620 63.98 1e-51 ferredoxin-dependent glutamate synthase 1 chloroplastic/mitochondrial
blastp_kegg lcl|tcc:TCM_024267 1 218 + 218 Gaps:65 14.22 1624 63.20 2e-51 Glutamate synthase 1 isoform 1
blastp_pdb 1ofe_B 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
blastp_pdb 1ofe_A 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
blastp_pdb 1ofd_B 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
blastp_pdb 1ofd_A 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
blastp_pdb 1lm1_A 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 Ferredoxin-dependent glutamate synthase
blastp_pdb 1llz_A 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 Ferredoxin-dependent glutamate synthase
blastp_pdb 1llw_A 1 222 + 222 Gaps:2 8.49 1520 65.12 2e-26 mol:protein length:1520 Ferredoxin-dependent glutamate synthase
blastp_pdb 2vdc_F 2 219 + 218 Gaps:53 14.06 1472 37.68 5e-21 mol:protein length:1472 GLUTAMATE SYNTHASE [NADPH] LARGE CHAIN
blastp_pdb 2vdc_E 2 219 + 218 Gaps:53 14.06 1472 37.68 5e-21 mol:protein length:1472 GLUTAMATE SYNTHASE [NADPH] LARGE CHAIN
blastp_pdb 2vdc_D 2 219 + 218 Gaps:53 14.06 1472 37.68 5e-21 mol:protein length:1472 GLUTAMATE SYNTHASE [NADPH] LARGE CHAIN
blastp_uniprot_sprot sp|Q43155|GLTB_SPIOL 1 218 + 218 Gaps:67 17.40 1517 57.20 9e-57 Ferredoxin-dependent glutamate synthase chloroplastic OS Spinacia oleracea PE 1 SV 3
blastp_uniprot_sprot sp|Q69RJ0|GLTB_ORYSJ 1 218 + 218 Gaps:63 16.35 1615 53.41 1e-51 Ferredoxin-dependent glutamate synthase chloroplastic OS Oryza sativa subsp. japonica GN GLU PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZNZ7|GLTB1_ARATH 1 218 + 218 Gaps:56 13.01 1622 63.03 2e-50 Ferredoxin-dependent glutamate synthase 1 chloroplastic/mitochondrial OS Arabidopsis thaliana GN GLU1 PE 1 SV 3
blastp_uniprot_sprot sp|P23225|GLTB_MAIZE 1 218 + 218 Gaps:63 16.34 1616 52.65 7e-50 Ferredoxin-dependent glutamate synthase chloroplastic OS Zea mays GN GLSF PE 1 SV 1
blastp_uniprot_sprot sp|Q9T0P4|GLTB2_ARATH 1 218 + 218 Gaps:56 13.01 1629 61.32 6e-49 Ferredoxin-dependent glutamate synthase 2 chloroplastic OS Arabidopsis thaliana GN GLU2 PE 2 SV 2
blastp_uniprot_sprot sp|Q08258|GLTB_HORVU 1 122 + 122 Gaps:56 40.83 436 52.81 1e-47 Ferredoxin-dependent glutamate synthase (Fragment) OS Hordeum vulgare PE 1 SV 2
blastp_uniprot_sprot sp|P51375|GLTB_PORPU 1 222 + 222 none 8.00 1538 69.11 4e-30 Ferredoxin-dependent glutamate synthase OS Porphyra purpurea GN gltB PE 3 SV 1
blastp_uniprot_sprot sp|Q1XDB2|GLTB_PYRYE 1 222 + 222 none 8.00 1538 69.11 1e-29 Ferredoxin-dependent glutamate synthase OS Pyropia yezoensis GN gltB PE 3 SV 1
blastp_uniprot_sprot sp|Q06434|GLTB_ANTSP 1 217 + 217 Gaps:1 8.07 1536 65.32 3e-28 Ferredoxin-dependent glutamate synthase OS Antithamnion sp. GN gltB PE 3 SV 1
blastp_uniprot_sprot sp|P55038|GLTS_SYNY3 1 222 + 222 Gaps:2 8.29 1556 65.12 7e-26 Ferredoxin-dependent glutamate synthase 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN gltS PE 1 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 121 121 PTHR11938:SF76 none none none
PANTHER 1 121 121 PTHR11938 none none none
Gene3D 1 83 83 G3DSA:3.60.20.10 none none IPR029055
Gene3D 86 122 37 G3DSA:3.60.20.10 none none IPR029055
SUPERFAMILY 2 123 122 SSF56235 none none IPR029055
Pfam 1 86 86 PF00310 none Glutamine amidotransferases class-II IPR000583
Pfam 186 218 33 PF01645 none Conserved region in glutamate synthase IPR002932
Gene3D 187 219 33 G3DSA:3.20.20.70 none none IPR013785
SUPERFAMILY 186 219 34 SSF51395 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting