Protein : Qrob_P0249620.2 Q. robur
Protein Identifier  ? Qrob_P0249620.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR24115:SF413 - KINESIN-LIKE PROTEIN KIN12A-RELATED (PTHR24115:SF413) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 265  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003777 microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO:0007018 microtubule-based movement A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO:0005871 kinesin complex Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101225321 54 248 + 195 Gaps:22 18.26 1139 58.17 2e-38 kinesin-like protein KIN12A-like
blastp_kegg lcl|csv:101203593 54 248 + 195 Gaps:22 18.26 1139 58.17 2e-38 kinesin-like protein KIN12A-like
blastp_kegg lcl|cmo:103491058 71 248 + 178 Gaps:16 17.29 1151 59.80 2e-38 kinesin-like protein KIN12B
blastp_kegg lcl|cit:102623428 6 245 + 240 Gaps:65 23.59 1174 57.40 4e-36 kinesin-like protein KIN12B-like
blastp_kegg lcl|obr:102704962 33 239 + 207 Gaps:86 25.98 1128 35.49 2e-32 kinesin-like protein KIN12A-like
blastp_kegg lcl|dosa:Os03t0587200-01 30 239 + 210 Gaps:82 25.51 1129 37.50 4e-32 Os03g0587200 Kinesin motor region domain containing protein.
blastp_kegg lcl|osa:4333349 30 239 + 210 Gaps:82 25.51 1129 37.50 4e-32 Os03g0587200
blastp_kegg lcl|cic:CICLE_v10007280mg 6 245 + 240 Gaps:65 23.59 1174 56.68 5e-32 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000411mg 8 248 + 241 Gaps:55 24.50 1200 56.80 5e-32 hypothetical protein
blastp_kegg lcl|sita:101784307 38 239 + 202 Gaps:90 25.18 1128 37.68 7e-32 kinesin-like protein KIN12B-like
blastp_uniprot_sprot sp|Q8L7Y8|KN12B_ARATH 143 242 + 100 Gaps:14 8.68 1313 47.37 5e-19 Kinesin-like protein KIN12B OS Arabidopsis thaliana GN KIN12B PE 1 SV 1
blastp_uniprot_sprot sp|Q9LDN0|KN12A_ARATH 143 242 + 100 Gaps:14 8.82 1292 50.00 2e-18 Kinesin-like protein KIN12A OS Arabidopsis thaliana GN KIN12A PE 1 SV 1
rpsblast_cdd gnl|CDD|203475 33 242 + 210 Gaps:69 58.61 488 44.76 1e-31 pfam06548 Kinesin-related Kinesin-related. This family represents a region within kinesin-related proteins from higher plants. Many family members also contain the pfam00225 domain. Kinesins are ATP-driven microtubule motor proteins that produce directed force. Some family members are associated with the phragmoplast a structure composed mainly of microtubules that executes cytokinesis in higher plants.
rpsblast_cdd gnl|CDD|178730 6 242 + 237 Gaps:70 23.64 1320 35.26 8e-23 PLN03188 PLN03188 kinesin-12 family protein Provisional.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 147 235 89 PTHR24115 none none IPR027640
Coils 193 221 29 Coil none none none
Coils 50 71 22 Coil none none none
PANTHER 147 235 89 PTHR24115:SF413 none none none
Pfam 144 242 99 PF06548 none Kinesin-related IPR010544
Pfam 7 75 69 PF06548 none Kinesin-related IPR010544

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting