Protein : Qrob_P0248260.2 Q. robur
Protein Identifier  ? Qrob_P0248260.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR21717:SF12 - PROTEIN LCHN [SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q1LX49] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 690  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0042162 telomeric DNA binding Interacting selectively and non-covalently with a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100257090 1 689 + 689 Gaps:7 100.00 696 68.53 0.0 telomere repeat-binding protein 5-like
blastp_kegg lcl|cit:102622616 1 689 + 689 Gaps:19 100.00 706 67.00 0.0 telomere repeat-binding protein 5-like
blastp_kegg lcl|tcc:TCM_041816 1 689 + 689 Gaps:8 97.35 716 66.43 0.0 TRF-like 2 putative isoform 1
blastp_kegg lcl|pper:PRUPE_ppa002403mg 1 689 + 689 Gaps:19 100.00 676 70.27 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s03730g 1 689 + 689 Gaps:21 100.00 682 65.69 0.0 POPTRDRAFT_203733 telomere-binding family protein
blastp_kegg lcl|pop:POPTR_0001s24840g 1 689 + 689 Gaps:35 100.00 720 63.19 0.0 POPTRDRAFT_641182 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0352020 1 689 + 689 Gaps:15 100.00 688 65.26 0.0 hypothetical protein
blastp_kegg lcl|pmum:103322291 1 689 + 689 Gaps:29 100.00 686 68.80 0.0 telomere repeat-binding protein 5
blastp_kegg lcl|pxb:103954293 1 689 + 689 Gaps:30 100.00 687 66.38 0.0 telomere repeat-binding protein 5-like
blastp_kegg lcl|pxb:103964670 1 689 + 689 Gaps:27 100.00 690 65.36 0.0 telomere repeat-binding protein 5-like
blastp_pdb 2juh_A 574 681 + 108 none 89.26 121 83.33 1e-57 mol:protein length:121 Telomere binding protein TBP1
blastp_pdb 2qhb_B 587 672 + 86 none 100.00 86 89.53 3e-48 mol:protein length:86 Telomere binding protein TBP1
blastp_pdb 2qhb_A 587 672 + 86 none 100.00 86 89.53 3e-48 mol:protein length:86 Telomere binding protein TBP1
blastp_pdb 2roh_A 569 671 + 103 Gaps:1 83.61 122 77.45 7e-47 mol:protein length:122 Telomere binding protein-1
blastp_pdb 2ckx_A 591 673 + 83 none 100.00 83 89.16 2e-46 mol:protein length:83 TELOMERE BINDING PROTEIN TBP1
blastp_pdb 2aje_A 586 671 + 86 none 81.90 105 88.37 5e-46 mol:protein length:105 telomere repeat-binding protein
blastp_uniprot_sprot sp|Q6R0E3|TRP5_ARATH 1 684 + 684 Gaps:94 98.73 630 52.41 2e-158 Telomere repeat-binding protein 5 OS Arabidopsis thaliana GN TRP5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SNB9|TRP2_ARATH 1 683 + 683 Gaps:164 98.55 553 55.78 5e-139 Telomere repeat-binding protein 2 OS Arabidopsis thaliana GN TRP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FFY9|TRP4_ARATH 1 689 + 689 Gaps:111 99.06 640 44.79 6e-135 Telomere repeat-binding protein 4 OS Arabidopsis thaliana GN TRP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C7B1|TRP3_ARATH 1 680 + 680 Gaps:95 96.77 619 46.58 2e-127 Telomere repeat-binding protein 3 OS Arabidopsis thaliana GN TRP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L7L8|TRP1_ARATH 8 671 + 664 Gaps:153 93.60 578 52.13 1e-121 Telomere repeat-binding protein 1 OS Arabidopsis thaliana GN TRP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LL45|TBP1_ORYSJ 1 686 + 686 Gaps:133 99.68 633 41.84 3e-102 Telomere-binding protein 1 OS Oryza sativa subsp. japonica GN TBP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9M347|TRP6_ARATH 330 671 + 342 Gaps:22 63.00 400 56.75 3e-43 Telomere repeat-binding protein 6 OS Arabidopsis thaliana GN TRP6 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 399 463 65 PS50053 none Ubiquitin domain profile. IPR000626
Gene3D 590 640 51 G3DSA:1.10.10.60 none none IPR009057
PANTHER 1 200 200 PTHR21717 none none none
SUPERFAMILY 591 672 82 SSF46689 none none IPR009057
ProSiteProfiles 585 644 60 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
SMART 589 642 54 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
PANTHER 281 333 53 PTHR21717:SF12 none none IPR031105
PANTHER 361 688 328 PTHR21717 none none none
PANTHER 281 333 53 PTHR21717 none none none
PANTHER 361 688 328 PTHR21717:SF12 none none IPR031105
PANTHER 1 200 200 PTHR21717:SF12 none none IPR031105
SUPERFAMILY 393 484 92 SSF54236 none none IPR029071

0 Localization

0 Qtllist

0 Targeting