Protein : Qrob_P0247860.2 Q. robur
Protein Identifier  ? Qrob_P0247860.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 240  
Kegg Orthology  K01051
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103440901 6 234 + 229 Gaps:1 44.40 518 51.30 2e-75 pectinesterase 2-like
blastp_kegg lcl|fve:101306089 6 234 + 229 Gaps:1 50.11 459 49.13 4e-75 pectinesterase 2-like
blastp_kegg lcl|pxb:103963405 6 234 + 229 Gaps:1 44.40 518 51.30 5e-75 pectinesterase 2-like
blastp_kegg lcl|pxb:103932677 6 234 + 229 Gaps:1 44.40 518 51.30 6e-75 pectinesterase 2-like
blastp_kegg lcl|pmum:103319517 6 234 + 229 Gaps:2 40.60 564 51.53 8e-75 probable pectinesterase/pectinesterase inhibitor 20
blastp_kegg lcl|pmum:103319516 6 234 + 229 Gaps:2 40.60 564 51.53 2e-74 probable pectinesterase/pectinesterase inhibitor 7
blastp_kegg lcl|cic:CICLE_v10023718mg 10 239 + 230 Gaps:2 42.59 540 51.30 4e-74 hypothetical protein
blastp_kegg lcl|fve:101291827 6 234 + 229 Gaps:2 40.46 566 51.53 5e-74 probable pectinesterase/pectinesterase inhibitor 20-like
blastp_kegg lcl|mus:103975191 16 234 + 219 Gaps:1 92.05 239 50.00 5e-74 pectinesterase-like
blastp_kegg lcl|cit:102626311 10 239 + 230 Gaps:2 40.56 567 51.30 8e-74 probable pectinesterase/pectinesterase inhibitor 20-like
blastp_pdb 1xg2_A 16 234 + 219 Gaps:1 69.40 317 46.82 8e-67 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 16 233 + 218 Gaps:1 68.65 319 43.38 1e-58 mol:protein length:319 PECTINESTERASE
blastp_pdb 2ntq_B 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 8 145 + 138 Gaps:25 45.32 342 33.55 1e-11 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|O04887|PME2_CITSI 6 234 + 229 Gaps:2 44.90 510 47.60 1e-70 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22256|PME20_ARATH 20 234 + 215 Gaps:2 38.39 560 51.16 4e-70 Probable pectinesterase/pectinesterase inhibitor 20 OS Arabidopsis thaliana GN PME20 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FHN5|PME59_ARATH 6 234 + 229 Gaps:3 43.28 536 46.98 1e-69 Probable pectinesterase/pectinesterase inhibitor 59 OS Arabidopsis thaliana GN PME59 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SRX4|PME7_ARATH 10 239 + 230 Gaps:2 39.72 579 46.96 2e-67 Probable pectinesterase/pectinesterase inhibitor 7 OS Arabidopsis thaliana GN PME7 PE 2 SV 1
blastp_uniprot_sprot sp|P85076|PME_ACTDE 8 232 + 225 Gaps:1 70.40 321 46.02 4e-67 Pectinesterase OS Actinidia deliciosa PE 1 SV 1
blastp_uniprot_sprot sp|Q43062|PME_PRUPE 6 237 + 232 Gaps:2 44.83 522 47.44 2e-66 Pectinesterase/pectinesterase inhibitor PPE8B OS Prunus persica PE 2 SV 1
blastp_uniprot_sprot sp|Q8RXK7|PME41_ARATH 10 234 + 225 Gaps:2 39.27 573 45.33 2e-66 Probable pectinesterase/pectinesterase inhibitor 41 OS Arabidopsis thaliana GN PME41 PE 2 SV 2
blastp_uniprot_sprot sp|O22149|PME17_ARATH 6 234 + 229 Gaps:3 44.62 511 45.61 3e-66 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FHN4|PME60_ARATH 6 237 + 232 Gaps:3 43.52 540 45.11 4e-65 Probable pectinesterase/pectinesterase inhibitor 60 OS Arabidopsis thaliana GN PME60 PE 2 SV 1
blastp_uniprot_sprot sp|O49298|PME6_ARATH 6 232 + 227 Gaps:8 39.53 554 47.03 1e-64 Probable pectinesterase/pectinesterase inhibitor 6 OS Arabidopsis thaliana GN PME6 PE 2 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 6 235 230 G3DSA:2.160.20.10 none none IPR012334
SUPERFAMILY 6 234 229 SSF51126 none none IPR011050
PANTHER 8 239 232 PTHR31707:SF1 none none none
PANTHER 8 239 232 PTHR31707 none none none
Pfam 6 222 217 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting