Protein : Qrob_P0247590.2 Q. robur
Protein Identifier  ? Qrob_P0247590.2 Organism . Name  Quercus robur
Score  22.2 Score Type  egn
Protein Description  (M=4) PTHR22951//PTHR22951:SF13 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED (PTHR22951:SF13) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 270  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005545 1-phosphatidylinositol binding Interacting selectively and non-covalently with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
GO:0030136 clathrin-coated vesicle A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
GO:0030276 clathrin binding Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.
GO:0048268 clathrin coat assembly The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
GO:0005543 phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011262 1 226 + 226 Gaps:37 54.18 467 50.20 7e-63 Epsin N-terminal domain-containing protein / clathrin assembly protein-related putative
blastp_kegg lcl|cic:CICLE_v10018051mg 2 227 + 226 Gaps:33 56.98 437 51.81 4e-62 hypothetical protein
blastp_kegg lcl|cit:102612418 2 227 + 226 Gaps:33 56.98 437 51.41 6e-62 putative clathrin assembly protein At2g25430-like
blastp_kegg lcl|pxb:103943267 1 223 + 223 Gaps:49 53.64 481 48.45 1e-59 probable clathrin assembly protein At4g32285
blastp_kegg lcl|mdm:103444624 1 223 + 223 Gaps:49 53.64 481 48.84 1e-58 probable clathrin assembly protein At4g32285
blastp_kegg lcl|rcu:RCOM_1148790 1 200 + 200 Gaps:24 48.46 454 50.91 3e-56 clathrin assembly protein putative (EC:1.3.1.74)
blastp_kegg lcl|pmum:103321342 1 186 + 186 Gaps:27 38.34 493 60.32 3e-56 putative clathrin assembly protein At2g25430
blastp_kegg lcl|vvi:100855035 1 235 + 235 Gaps:31 57.77 457 44.70 8e-55 putative clathrin assembly protein At2g25430-like
blastp_kegg lcl|fve:101300342 1 245 + 245 Gaps:32 57.42 458 44.87 2e-54 putative clathrin assembly protein At2g25430-like
blastp_kegg lcl|pper:PRUPE_ppa019525mg 1 119 + 119 Gaps:15 28.76 466 67.91 4e-54 hypothetical protein
blastp_uniprot_sprot sp|P94017|CAP9_ARATH 6 124 + 119 Gaps:15 19.36 692 26.87 6e-13 Putative clathrin assembly protein At1g14910 OS Arabidopsis thaliana GN At1g14910 PE 2 SV 2
blastp_uniprot_sprot sp|Q8S9J8|CAP1_ARATH 6 120 + 115 Gaps:15 20.47 635 30.77 2e-12 Probable clathrin assembly protein At4g32285 OS Arabidopsis thaliana GN At4g32285 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LBH2|CAP8_ARATH 7 155 + 149 Gaps:20 28.90 571 26.06 3e-12 Putative clathrin assembly protein At2g01600 OS Arabidopsis thaliana GN At2g01600 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LF20|CAP2_ARATH 6 111 + 106 Gaps:15 18.53 653 31.40 2e-11 Putative clathrin assembly protein At2g25430 OS Arabidopsis thaliana GN At2g25430 PE 1 SV 2
blastp_uniprot_sprot sp|Q8VYT2|CAP6_ARATH 7 92 + 86 none 14.31 601 31.40 4e-10 Putative clathrin assembly protein At4g25940 OS Arabidopsis thaliana GN At4g25940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVD8|CAP7_ARATH 7 92 + 86 none 14.55 591 30.23 1e-09 Putative clathrin assembly protein At5g57200 OS Arabidopsis thaliana GN At5g57200 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LHS0|CAP10_ARATH 7 92 + 86 none 15.81 544 33.72 3e-09 Putative clathrin assembly protein At5g35200 OS Arabidopsis thaliana GN At5g35200 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVN6|AP180_ARATH 15 104 + 90 Gaps:2 13.48 653 35.23 1e-08 Clathrin coat assembly protein AP180 OS Arabidopsis thaliana GN AP180 PE 1 SV 1
rpsblast_cdd gnl|CDD|203708 8 112 + 105 Gaps:15 43.17 278 28.33 6e-10 pfam07651 ANTH ANTH domain. AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4 5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.
rpsblast_kog gnl|CDD|35472 1 201 + 201 Gaps:28 42.97 491 23.22 1e-17 KOG0251 KOG0251 KOG0251 Clathrin assembly protein AP180 and related proteins contain ENTH domain [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 6 99 94 G3DSA:1.20.58.150 none none IPR014712
PANTHER 3 175 173 PTHR22951 none none none
PANTHER 3 175 173 PTHR22951:SF13 none none none
SUPERFAMILY 3 113 111 SSF89009 none none none
Pfam 5 91 87 PF07651 none ANTH domain IPR011417

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting