Protein : Qrob_P0237210.2 Q. robur
Protein Identifier  ? Qrob_P0237210.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=1) PTHR24222:SF22 - ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC (PTHR24222:SF22) Code Enzyme  EC:3.6.3.43
Gene Prediction Quality  validated Protein length 

Sequence

Length: 668  
Kegg Orthology  K05656
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0042626 ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100249410 10 667 + 658 Gaps:57 98.87 705 73.03 0.0 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa002192mg 5 667 + 663 Gaps:48 99.43 703 74.68 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321849 5 667 + 663 Gaps:48 99.43 703 74.11 0.0 ABC transporter B family member 26 chloroplastic
blastp_kegg lcl|tcc:TCM_010512 1 666 + 666 Gaps:47 99.86 700 73.25 0.0 Transporter associated with antigen processing protein 1
blastp_kegg lcl|mdm:103452034 1 667 + 667 Gaps:44 99.30 710 72.62 0.0 ABC transporter B family member 26 chloroplastic
blastp_kegg lcl|cit:102609116 23 667 + 645 Gaps:43 91.81 745 73.25 0.0 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_002G150000g 1 667 + 667 Gaps:43 96.13 724 71.98 0.0 hypothetical protein
blastp_kegg lcl|fve:101302805 1 667 + 667 Gaps:46 99.01 706 72.10 0.0 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|gmx:100775951 1 667 + 667 Gaps:44 100.00 701 70.47 0.0 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|gmx:100813359 1 667 + 667 Gaps:44 100.00 701 70.33 0.0 ABC transporter B family member 26 chloroplastic-like
blastp_pdb 2yl4_A 209 663 + 455 Gaps:41 80.00 595 37.39 2e-88 mol:protein length:595 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 4aa3_A 209 663 + 455 Gaps:41 76.90 619 37.18 4e-87 mol:protein length:619 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 3g5u_B 182 665 + 484 Gaps:93 77.57 1284 36.04 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_A 182 665 + 484 Gaps:93 77.57 1284 36.04 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_B 182 665 + 484 Gaps:93 77.57 1284 36.24 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_A 182 665 + 484 Gaps:93 77.57 1284 36.24 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_B 182 665 + 484 Gaps:93 77.57 1284 36.24 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_A 182 665 + 484 Gaps:93 77.57 1284 36.24 8e-78 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3b5w_H 182 662 + 481 Gaps:49 87.63 582 32.94 3e-68 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_pdb 3b5w_G 182 662 + 481 Gaps:49 87.63 582 32.94 3e-68 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_uniprot_sprot sp|Q8RY46|AB26B_ARATH 15 666 + 652 Gaps:43 98.71 700 69.61 0.0 ABC transporter B family member 26 chloroplastic OS Arabidopsis thaliana GN ABCB26 PE 1 SV 1
blastp_uniprot_sprot sp|Q9NP78|ABCB9_HUMAN 147 662 + 516 Gaps:51 71.41 766 38.39 1e-98 ATP-binding cassette sub-family B member 9 OS Homo sapiens GN ABCB9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JJ59|ABCB9_MOUSE 147 662 + 516 Gaps:51 71.78 762 38.21 2e-98 ATP-binding cassette sub-family B member 9 OS Mus musculus GN Abcb9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9QYJ4|ABCB9_RAT 147 662 + 516 Gaps:51 71.78 762 38.21 4e-98 ATP-binding cassette sub-family B member 9 OS Rattus norvegicus GN Abcb9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FNU2|AB25B_ORYSJ 128 662 + 535 Gaps:65 89.86 641 34.20 4e-96 ABC transporter B family member 25 OS Oryza sativa subsp. japonica GN OsABCB25 PE 2 SV 1
blastp_uniprot_sprot sp|Q54BU4|ABCB1_DICDI 114 662 + 549 Gaps:45 64.03 909 34.54 2e-93 ABC transporter B family member 1 OS Dictyostelium discoideum GN abcB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9JI39|ABCBA_MOUSE 209 663 + 455 Gaps:41 66.57 715 37.18 1e-88 ATP-binding cassette sub-family B member 10 mitochondrial OS Mus musculus GN Abcb10 PE 2 SV 1
blastp_uniprot_sprot sp|Q54W24|ABCB4_DICDI 196 658 + 463 Gaps:34 62.19 767 37.95 9e-88 ABC transporter B family member 4 OS Dictyostelium discoideum GN abcB4 PE 3 SV 1
blastp_uniprot_sprot sp|Q5RKI8|ABCB8_RAT 209 663 + 455 Gaps:50 66.25 714 41.23 4e-86 ATP-binding cassette sub-family B member 8 mitochondrial OS Rattus norvegicus GN Abcb8 PE 2 SV 1
blastp_uniprot_sprot sp|Q56A55|ABCB8_DANRE 209 662 + 454 Gaps:30 66.11 714 37.92 5e-86 ATP-binding cassette sub-family B member 8 mitochondrial OS Danio rerio GN abcb8 PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 433 662 230 SSF52540 none none IPR027417
Phobius 182 208 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 138 161 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 456 588 133 PF00005 none ABC transporter IPR003439
ProSiteProfiles 416 661 246 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Phobius 283 667 385 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 162 181 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 208 393 186 PF00664 none ABC transporter transmembrane region IPR011527
ProSiteProfiles 141 407 267 PS50929 none ABC transporter integral membrane type-1 fused domain profile. IPR011527
Gene3D 456 656 201 G3DSA:3.40.50.300 none none IPR027417
Phobius 209 253 45 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 74 666 593 PTHR24222:SF22 none none none
PANTHER 74 666 593 PTHR24222 none none none
Phobius 1 137 137 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 128 423 296 SSF90123 none none IPR011527
ProSitePatterns 560 574 15 PS00211 none ABC transporters family signature. IPR017871
Phobius 254 282 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 451 638 188 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 128 423 296 G3DSA:1.20.1560.10 none none none

4 Localization

Analysis Start End Length
TMHMM 252 283 31
TMHMM 139 161 22
TMHMM 355 377 22
TMHMM 182 204 22

0 Qtllist

0 Targeting