Protein : Qrob_P0236630.2 Q. robur
Protein Identifier  ? Qrob_P0236630.2 Organism . Name  Quercus robur
Score  96.3 Score Type  egn
Protein Description  (M=1) 2.4.1.223//2.4.1.224 - Glucuronyl-galactosyl-proteoglycan 4-alpha-N- acetylglucosaminyltransferase. // Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N- acetylglucosaminyltransferase. Code Enzyme  EC:2.4.1.223, EC:2.4.1.224
Gene Prediction Quality  validated Protein length 

Sequence

Length: 169  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006024 glycosaminoglycan biosynthetic process The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.
GO:0015012 heparan sulfate proteoglycan biosynthetic process The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332754 1 166 + 166 none 50.46 329 71.69 1e-74 exostosin-2
blastp_kegg lcl|pxb:103936450 1 166 + 166 none 50.61 328 71.69 1e-74 exostosin-2-like
blastp_kegg lcl|mdm:103455113 1 166 + 166 none 50.61 328 70.48 5e-74 exostosin-2-like
blastp_kegg lcl|cic:CICLE_v10032067mg 1 166 + 166 Gaps:4 50.60 332 72.62 8e-74 hypothetical protein
blastp_kegg lcl|cit:102616130 1 166 + 166 Gaps:4 50.60 332 72.62 8e-74 exostosin-2-like
blastp_kegg lcl|pper:PRUPE_ppa008488mg 1 166 + 166 none 50.46 329 71.08 1e-73 hypothetical protein
blastp_kegg lcl|pxb:103942405 1 166 + 166 none 50.15 331 69.88 1e-72 exostosin-2
blastp_kegg lcl|mdm:103455108 1 166 + 166 none 50.61 328 71.08 1e-72 exostosin-2-like
blastp_kegg lcl|fve:101294521 2 166 + 165 none 47.41 348 70.91 1e-72 exostosin-2-like
blastp_kegg lcl|mtr:MTR_5g082110 1 166 + 166 Gaps:3 49.56 341 67.46 5e-68 Exostosin-2
rpsblast_cdd gnl|CDD|192236 69 162 + 94 Gaps:12 34.43 244 35.71 3e-18 pfam09258 Glyco_transf_64 Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate.
rpsblast_kog gnl|CDD|36240 4 162 + 159 Gaps:25 22.00 691 32.89 4e-26 KOG1022 KOG1022 KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism Cell wall/membrane/envelope biogenesis Extracellular structures].
rpsblast_kog gnl|CDD|37475 64 162 + 99 Gaps:11 9.70 907 32.95 2e-07 KOG2264 KOG2264 KOG2264 Exostosin EXT1L [Signal transduction mechanisms].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 69 163 95 PF09258 none Glycosyl transferase family 64 domain IPR015338
Phobius 49 168 120 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 28 28 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 44 48 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 65 162 98 G3DSA:3.90.550.10 none none IPR029044
Phobius 1 48 48 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 29 43 15 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Mitochondrion 3 0.252 0.727 NON-PLANT 16