Protein : Qrob_P0232510.2 Q. robur
Protein Identifier  ? Qrob_P0232510.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) KOG2922 - Uncharacterized conserved protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 267  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0015095 magnesium ion transmembrane transporter activity Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.
GO:0015693 magnesium ion transport The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254444 9 257 + 249 Gaps:5 73.20 347 82.68 2e-145 magnesium transporter NIPA2-like
blastp_kegg lcl|rcu:RCOM_0664080 7 257 + 251 Gaps:5 72.93 351 78.12 2e-142 Non-imprinted in Prader-Willi/Angelman syndrome region protein putative
blastp_kegg lcl|sot:102596564 13 257 + 245 Gaps:5 72.46 345 76.80 2e-136 magnesium transporter NIPA2-like
blastp_kegg lcl|atr:s00134p00084100 13 257 + 245 Gaps:5 70.03 357 76.00 5e-136 AMTR_s00134p00084100 hypothetical protein
blastp_kegg lcl|sly:101260392 13 257 + 245 Gaps:5 72.67 344 76.80 9e-136 magnesium transporter NIPA2-like
blastp_kegg lcl|tcc:TCM_003147 13 242 + 230 none 62.16 370 83.04 9e-136 Non-imprinted in Prader-Willi/Angelman syndrome region protein isoform 1
blastp_kegg lcl|csv:101229459 12 243 + 232 none 96.67 240 80.60 1e-135 magnesium transporter NIPA2-like
blastp_kegg lcl|csv:101218768 12 264 + 253 none 71.67 353 75.10 4e-135 magnesium transporter NIPA2-like
blastp_kegg lcl|cmo:103500043 12 264 + 253 none 71.67 353 75.10 5e-135 magnesium transporter NIPA3-like
blastp_kegg lcl|mus:103979119 13 257 + 245 Gaps:5 70.03 357 74.80 1e-132 magnesium transporter NIPA3-like
blastp_uniprot_sprot sp|Q3SWX0|NIPA2_BOVIN 19 243 + 225 Gaps:1 62.78 360 48.67 1e-67 Magnesium transporter NIPA2 OS Bos taurus GN NIPA2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R7Q3|NIPA2_PONAB 19 243 + 225 Gaps:1 62.78 360 48.23 5e-67 Magnesium transporter NIPA2 OS Pongo abelii GN NIPA2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8N8Q9|NIPA2_HUMAN 19 243 + 225 Gaps:1 62.78 360 48.23 5e-67 Magnesium transporter NIPA2 OS Homo sapiens GN NIPA2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9JJC8|NIPA2_MOUSE 19 243 + 225 Gaps:1 62.95 359 47.35 2e-66 Magnesium transporter NIPA2 OS Mus musculus GN Nipa2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8BZF2|NIPA4_MOUSE 19 243 + 225 Gaps:1 55.67 406 45.58 1e-59 Magnesium transporter NIPA4 OS Mus musculus GN Nipal4 PE 1 SV 1
blastp_uniprot_sprot sp|Q0D2K0|NIPA4_HUMAN 19 243 + 225 Gaps:1 48.50 466 45.58 3e-59 Magnesium transporter NIPA4 OS Homo sapiens GN NIPAL4 PE 1 SV 3
blastp_uniprot_sprot sp|Q8BMW7|NIPA3_MOUSE 19 243 + 225 Gaps:1 54.33 416 49.12 1e-55 Magnesium transporter NIPA3 OS Mus musculus GN Nipal1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5RDB8|NIPA3_PONAB 19 257 + 239 Gaps:4 57.80 410 50.63 1e-49 Magnesium transporter NIPA3 OS Pongo abelii GN NIPAL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NVV3|NIPA3_HUMAN 19 256 + 238 Gaps:2 58.54 410 49.17 1e-48 Magnesium transporter NIPA3 OS Homo sapiens GN NIPAL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7RTP0|NIPA1_HUMAN 19 256 + 238 Gaps:10 71.12 329 43.59 6e-48 Magnesium transporter NIPA1 OS Homo sapiens GN NIPA1 PE 1 SV 1
rpsblast_cdd gnl|CDD|114381 14 243 + 230 none 76.67 300 64.78 5e-85 pfam05653 Mg_trans_NIPA Magnesium transporter NIPA. NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters.
rpsblast_kog gnl|CDD|38133 2 256 + 255 Gaps:1 76.42 335 63.67 3e-78 KOG2922 KOG2922 KOG2922 Uncharacterized conserved protein [Function unknown].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 241 246 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 85 89 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 62 135 74 SSF103481 none none none
PANTHER 1 243 243 PTHR12570 none none IPR008521
Phobius 62 84 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 20 41 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 15 245 231 PF05653 none Magnesium transporter NIPA IPR008521
Phobius 174 184 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 220 240 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 116 135 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 208 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 247 265 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 155 173 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 266 266 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 136 154 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 243 243 PTHR12570:SF11 none none none
Phobius 90 109 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 110 115 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 209 219 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 42 61 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

8 Localization

Analysis Start End Length
TMHMM 246 265 19
TMHMM 150 172 22
TMHMM 20 42 22
TMHMM 63 82 19
TMHMM 185 207 22
TMHMM 222 241 19
TMHMM 87 109 22
TMHMM 116 135 19

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting