Protein : Qrob_P0227580.2 Q. robur
Protein Identifier  ? Qrob_P0227580.2 Organism . Name  Quercus robur
Score  63.5 Score Type  egn
Protein Description  (M=2) K02291 - phytoene synthase [EC:2.5.1.32] Code Enzyme  EC:2.5.1.32
Gene Prediction Quality  validated Protein length 

Sequence

Length: 281  
Kegg Orthology  K02291
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).
GO:0016740 transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101290784 2 279 + 278 none 69.85 398 84.17 8e-170 phytoene synthase chloroplastic-like
blastp_kegg lcl|pxb:103965679 2 279 + 278 none 70.20 396 83.81 3e-169 phytoene synthase 2 chloroplastic-like
blastp_kegg lcl|mdm:103443160 2 280 + 279 Gaps:1 70.53 397 83.21 2e-168 phytoene synthase 2 chloroplastic-like
blastp_kegg lcl|mdm:103405286 4 279 + 276 none 71.13 388 84.42 2e-168 phytoene synthase 2 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa006596mg 2 279 + 278 none 68.81 404 83.45 4e-168 hypothetical protein
blastp_kegg lcl|gmx:100776503 2 280 + 279 none 70.45 396 82.44 1e-167 phytoene synthase chloroplastic-like
blastp_kegg lcl|tcc:TCM_001945 2 277 + 276 none 70.05 394 84.06 3e-167 Phytoene synthase
blastp_kegg lcl|pxb:103947408 2 279 + 278 none 70.03 397 82.73 7e-167 phytoene synthase 2 chloroplastic-like
blastp_kegg lcl|csv:101223326 2 280 + 279 none 71.91 388 81.72 2e-166 phytoene synthase chloroplastic-like
blastp_kegg lcl|csv:101214823 2 280 + 279 none 71.91 388 81.72 2e-166 phytoene synthase chloroplastic-like
blastp_pdb 4ea2_A 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 4ea1_A 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 4ea0_B 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 4ea0_A 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 4e9z_A 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 4e9u_A 3 256 + 254 Gaps:10 87.80 287 28.17 1e-20 mol:protein length:287 Dehydrosqualene synthase
blastp_pdb 3tfv_A 3 256 + 254 Gaps:10 86.01 293 28.17 1e-20 mol:protein length:293 Dehydrosqualene synthase
blastp_pdb 3tfp_A 3 256 + 254 Gaps:10 86.01 293 28.17 1e-20 mol:protein length:293 Dehydrosqualene synthase
blastp_pdb 3tfn_A 3 256 + 254 Gaps:10 86.01 293 28.17 1e-20 mol:protein length:293 Dehydrosqualene synthase
blastp_pdb 3nri_A 3 256 + 254 Gaps:10 86.01 293 28.17 1e-20 mol:protein length:293 Dehydrosqualene synthase
blastp_uniprot_sprot sp|Q9SSU8|PSY_DAUCA 2 274 + 273 none 68.59 398 77.66 2e-155 Phytoene synthase chloroplastic OS Daucus carota GN PSY PE 2 SV 1
blastp_uniprot_sprot sp|P49293|PSY_CUCME 2 272 + 271 Gaps:1 64.45 422 77.94 2e-154 Phytoene synthase chloroplastic OS Cucumis melo GN PSY PE 2 SV 1
blastp_uniprot_sprot sp|P49085|PSY_MAIZE 2 269 + 268 none 65.37 410 77.61 3e-153 Phytoene synthase chloroplastic OS Zea mays GN Y1 PE 3 SV 1
blastp_uniprot_sprot sp|P08196|PSY1_SOLLC 5 277 + 273 none 66.26 412 75.82 2e-152 Phytoene synthase 1 chloroplastic OS Solanum lycopersicum GN PSY1 PE 1 SV 2
blastp_uniprot_sprot sp|P53797|PSY_NARPS 2 269 + 268 none 63.36 423 77.24 8e-152 Phytoene synthase chloroplastic OS Narcissus pseudonarcissus GN PSY PE 2 SV 1
blastp_uniprot_sprot sp|P37271|PSY_ARATH 2 272 + 271 none 64.22 422 75.28 2e-151 Phytoene synthase chloroplastic OS Arabidopsis thaliana GN PSY1 PE 2 SV 2
blastp_uniprot_sprot sp|P37272|PSY_CAPAN 2 273 + 272 none 64.92 419 75.00 2e-150 Phytoene synthase chloroplastic OS Capsicum annuum GN PSY1 PE 2 SV 1
blastp_uniprot_sprot sp|P37273|PSY2_SOLLC 2 269 + 268 none 86.45 310 75.37 2e-149 Phytoene synthase 2 chloroplastic (Fragment) OS Solanum lycopersicum GN PSY2 PE 2 SV 1
blastp_uniprot_sprot sp|P37269|CRTB_SYNE7 2 267 + 266 Gaps:6 88.31 308 57.72 1e-107 All-trans-phytoene synthase OS Synechococcus elongatus (strain PCC 7942) GN crtB PE 1 SV 2
blastp_uniprot_sprot sp|P37294|CRTB_SYNY3 2 267 + 266 Gaps:6 80.71 337 54.78 4e-102 All-trans-phytoene synthase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN crtB PE 1 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 5 267 263 SSF48576 none none IPR008949
Phobius 103 125 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 5 280 276 PTHR31480 none none none
Phobius 1 102 102 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 142 167 26 PS01045 none Squalene and phytoene synthases signature 2. IPR019845
PANTHER 5 280 276 PTHR31480:SF2 none none none
Pfam 5 254 250 PF00494 none Squalene/phytoene synthase IPR002060
Gene3D 5 268 264 G3DSA:1.10.600.10 none none IPR008949
Phobius 126 280 155 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 106 121 16 PS01044 none Squalene and phytoene synthases signature 1. IPR019845

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Mitochondrion 3 0.188 0.629 NON-PLANT 24