Protein : Qrob_P0223770.2 Q. robur
Protein Identifier  ? Qrob_P0223770.2 Organism . Name  Quercus robur
Score  93.0 Score Type  egn
Protein Description  (M=1) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC (PTHR11206:SF101) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 568  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258511 1 567 + 567 Gaps:52 100.00 561 73.26 0.0 MATE efflux family protein-like
blastp_kegg lcl|pmum:103342929 1 566 + 566 Gaps:43 100.00 555 70.99 0.0 MATE efflux family protein 2 chloroplastic
blastp_kegg lcl|rcu:RCOM_0848190 1 566 + 566 Gaps:42 98.93 560 70.58 0.0 DNA-damage-inducible protein f putative
blastp_kegg lcl|mdm:103419403 1 566 + 566 Gaps:44 100.00 552 70.11 0.0 MATE efflux family protein 2 chloroplastic-like
blastp_kegg lcl|mdm:103433696 1 566 + 566 Gaps:44 100.00 552 70.11 0.0 MATE efflux family protein 2 chloroplastic
blastp_kegg lcl|pxb:103962142 1 566 + 566 Gaps:44 100.00 552 70.29 0.0 MATE efflux family protein 2 chloroplastic
blastp_kegg lcl|tcc:TCM_021597 1 566 + 566 Gaps:46 99.82 547 69.78 0.0 MATE efflux family protein 2 isoform 1
blastp_kegg lcl|pop:POPTR_0016s13370g 1 567 + 567 Gaps:74 93.26 608 69.31 0.0 POPTRDRAFT_577058 MATE efflux family protein
blastp_kegg lcl|pper:PRUPE_ppa026412mg 92 566 + 475 Gaps:34 99.78 460 75.38 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10011401mg 1 567 + 567 Gaps:54 100.00 555 69.73 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q84K71|MATE2_ARATH 14 560 + 547 Gaps:57 97.12 521 66.60 0.0 MATE efflux family protein 2 chloroplastic OS Arabidopsis thaliana GN DTX44 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SVE7|MATE3_ARATH 94 564 + 471 Gaps:46 81.25 560 50.33 4e-130 MATE efflux family protein 3 chloroplastic OS Arabidopsis thaliana GN DTX45 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SYD6|MATE1_ARATH 66 560 + 495 Gaps:87 98.64 515 43.31 1e-107 MATE efflux family protein 1 OS Arabidopsis thaliana GN MATE PE 2 SV 2
blastp_uniprot_sprot sp|Q9SFB0|FRD3_ARATH 74 556 + 483 Gaps:73 95.44 526 41.04 3e-94 MATE efflux family protein FRD3 OS Arabidopsis thaliana GN FRD3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8W4G3|MATE4_ARATH 98 553 + 456 Gaps:59 76.03 559 24.71 5e-07 MATE efflux family protein 4 chloroplastic OS Arabidopsis thaliana GN DTX46 PE 2 SV 1
rpsblast_cdd gnl|CDD|162043 105 477 + 373 Gaps:53 100.00 342 29.53 6e-34 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|30880 91 565 + 475 Gaps:50 97.80 455 28.76 2e-31 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|190033 105 508 + 404 Gaps:17 93.17 161 43.33 7e-09 pfam01554 MatE MatE. The MatE domain.
rpsblast_kog gnl|CDD|36561 73 539 + 467 Gaps:44 92.39 473 19.68 4e-27 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 358 561 204 PTHR11206:SF101 none none none
PANTHER 93 332 240 PTHR11206:SF101 none none none
Phobius 550 567 18 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 434 455 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 308 327 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 526 549 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 380 390 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 212 286 75 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 328 348 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 186 211 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 456 466 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 360 379 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 188 268 81 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Pfam 367 508 142 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 123 145 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 359 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 415 433 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 146 185 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 358 561 204 PTHR11206 none none none
PANTHER 93 332 240 PTHR11206 none none none
Phobius 520 525 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 490 500 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 391 414 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 91 91 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 92 111 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 467 489 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 112 122 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 501 519 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 287 307 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

9 Localization

Analysis Start End Length
TMHMM 356 378 22
TMHMM 465 487 22
TMHMM 499 521 22
TMHMM 193 215 22
TMHMM 235 257 22
TMHMM 393 415 22
TMHMM 285 307 22
TMHMM 526 548 22
TMHMM 436 455 19

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 50   Mitochondrion 5 0.022 0.667 NON-PLANT 50