Protein : Qrob_P0219540.2 Q. robur
Protein Identifier  ? Qrob_P0219540.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10015//PTHR10015:SF143 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 332  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0018s05770g 5 331 + 327 Gaps:22 97.64 339 64.65 4e-137 POPTRDRAFT_261844 hypothetical protein
blastp_kegg lcl|tcc:TCM_037888 5 331 + 327 Gaps:30 97.94 340 62.76 3e-132 Heat shock transcription factor C1 putative
blastp_kegg lcl|fve:101304412 5 331 + 327 Gaps:33 91.16 362 64.24 4e-131 heat stress transcription factor C-1-like
blastp_kegg lcl|vvi:100250904 5 331 + 327 Gaps:36 98.18 329 62.54 3e-123 heat stress transcription factor C-1-like
blastp_kegg lcl|cit:102615136 5 331 + 327 Gaps:33 98.03 355 56.03 2e-118 heat stress transcription factor C-1-like
blastp_kegg lcl|cic:CICLE_v10008768mg 5 331 + 327 Gaps:33 98.03 355 55.75 2e-117 hypothetical protein
blastp_kegg lcl|pxb:103962963 2 331 + 330 Gaps:34 98.84 344 59.41 2e-116 heat stress transcription factor C-1
blastp_kegg lcl|mdm:103415780 2 331 + 330 Gaps:40 98.84 344 57.65 2e-115 heat stress transcription factor C-1-like
blastp_kegg lcl|pmum:103340933 2 253 + 252 Gaps:21 76.44 331 70.75 2e-115 heat stress transcription factor C-1
blastp_kegg lcl|rcu:RCOM_1053010 5 331 + 327 Gaps:49 97.92 337 63.03 1e-113 DNA binding protein putative
blastp_pdb 2ldu_A 1 99 + 99 Gaps:11 88.00 125 48.18 1e-25 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 7 99 + 93 Gaps:10 97.17 106 36.89 9e-18 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 7 99 + 93 Gaps:10 97.17 106 36.89 9e-18 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 10 83 + 74 Gaps:11 83.33 102 42.35 2e-16 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 10 83 + 74 Gaps:11 92.39 92 42.35 3e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q9LV52|HSFC1_ARATH 6 331 + 326 Gaps:47 96.06 330 55.21 3e-93 Heat stress transcription factor C-1 OS Arabidopsis thaliana GN HSFC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q942D6|HFC1B_ORYSJ 3 177 + 175 Gaps:4 70.80 250 52.54 2e-61 Heat stress transcription factor C-1b OS Oryza sativa subsp. japonica GN HSFC1B PE 2 SV 1
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 9 202 + 194 Gaps:19 59.66 357 48.36 3e-60 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
blastp_uniprot_sprot sp|Q6EUG4|HFC2A_ORYSJ 7 200 + 194 Gaps:32 72.48 298 48.61 4e-60 Heat stress transcription factor C-2a OS Oryza sativa subsp. japonica GN HSFC2A PE 2 SV 1
blastp_uniprot_sprot sp|Q6VBA4|HFC1A_ORYSJ 2 189 + 188 Gaps:38 63.13 339 48.60 2e-59 Heat stress transcription factor C-1a OS Oryza sativa subsp. japonica GN HSFC1A PE 2 SV 2
blastp_uniprot_sprot sp|Q0DBL6|HFC2B_ORYSJ 9 201 + 193 Gaps:31 80.58 278 45.09 2e-58 Heat stress transcription factor C-2b OS Oryza sativa subsp. japonica GN HSFC2B PE 3 SV 1
blastp_uniprot_sprot sp|Q6VBB2|HFA2B_ORYSJ 1 302 + 302 Gaps:50 87.63 372 38.34 9e-57 Heat stress transcription factor A-2b OS Oryza sativa subsp. japonica GN HSFA2B PE 2 SV 1
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 9 204 + 196 Gaps:30 44.66 506 46.46 8e-56 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|P41153|HSF8_SOLPE 10 190 + 181 Gaps:36 41.18 527 45.62 3e-53 Heat shock factor protein HSF8 OS Solanum peruvianum GN HSF8 PE 2 SV 1
blastp_uniprot_sprot sp|Q40152|HSF8_SOLLC 10 204 + 195 Gaps:36 43.83 527 43.72 3e-53 Heat shock factor protein HSF8 OS Solanum lycopersicum GN HSF8 PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 117 152 36 Coil none none none
SMART 6 99 94 SM00415 none heat shock factor IPR000232
PRINTS 10 33 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 61 73 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 48 60 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
ProSitePatterns 49 73 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
Pfam 10 102 93 PF00447 none HSF-type DNA-binding IPR000232
PANTHER 2 181 180 PTHR10015:SF143 none none IPR027709
Gene3D 8 99 92 G3DSA:1.10.10.10 none none IPR011991
SUPERFAMILY 7 99 93 SSF46785 none none none
PANTHER 2 181 180 PTHR10015 none none IPR027725

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting