Protein : Qrob_P0217410.2 Q. robur
Protein Identifier  ? Qrob_P0217410.2 Organism . Name  Quercus robur
Score  93.4 Score Type  egn
Protein Description  (M=12) PTHR11814:SF65 - SULFATE TRANSPORTER 1.1-RELATED (PTHR11814:SF65) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 186  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005886 plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO:0008271 secondary active sulfate transmembrane transporter activity Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.
GO:0008272 sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015116 sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s09310g 20 184 + 165 Gaps:18 28.06 645 67.40 2e-74 POPTRDRAFT_551540 high affinity sulfate transporter family protein
blastp_kegg lcl|sot:102577897 1 184 + 184 Gaps:18 30.44 657 63.00 3e-74 ST1 high affinity sulfate transporter type 1
blastp_kegg lcl|cam:101498007 1 184 + 184 Gaps:24 29.79 658 63.78 1e-72 sulfate transporter 1.3-like
blastp_kegg lcl|pop:POPTR_0005s16530g 20 184 + 165 Gaps:19 28.13 647 67.03 1e-72 POPTRDRAFT_760831 high affinity sulfate transporter family protein
blastp_kegg lcl|pxb:103966542 7 183 + 177 Gaps:19 29.09 660 63.54 2e-72 sulfate transporter 1.2-like
blastp_kegg lcl|pxb:103959034 7 183 + 177 Gaps:19 29.09 660 63.54 2e-72 sulfate transporter 1.2
blastp_kegg lcl|sly:543685 1 184 + 184 Gaps:18 30.44 657 61.00 2e-72 ST1 sulfate transporter 1
blastp_kegg lcl|vvi:100260708 29 184 + 156 Gaps:17 26.02 665 67.63 2e-72 high affinity sulfate transporter 2-like
blastp_kegg lcl|pper:PRUPE_ppa002542mg 7 183 + 177 Gaps:19 29.09 660 63.02 2e-72 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000528mg 6 184 + 179 Gaps:19 29.44 659 61.34 1e-71 hypothetical protein
blastp_uniprot_sprot sp|Q9FEP7|SUT13_ARATH 8 184 + 177 Gaps:19 29.88 656 56.12 2e-63 Sulfate transporter 1.3 OS Arabidopsis thaliana GN SULTR1 3 PE 2 SV 1
blastp_uniprot_sprot sp|P53392|SUT2_STYHA 1 184 + 184 Gaps:22 30.82 662 53.43 5e-59 High affinity sulfate transporter 2 OS Stylosanthes hamata GN ST2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAX3|SUT12_ARATH 21 184 + 164 Gaps:20 28.18 653 57.61 5e-59 Sulfate transporter 1.2 OS Arabidopsis thaliana GN SULTR1 2 PE 1 SV 1
blastp_uniprot_sprot sp|P53391|SUT1_STYHA 1 184 + 184 Gaps:25 31.03 667 51.21 6e-57 High affinity sulfate transporter 1 OS Stylosanthes hamata GN ST1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAY1|SUT11_ARATH 29 184 + 156 Gaps:18 26.81 649 56.90 2e-51 Sulfate transporter 1.1 OS Arabidopsis thaliana GN SULTR1 1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SV13|SUT31_ARATH 35 184 + 150 Gaps:17 25.38 658 52.10 5e-44 Sulfate transporter 3.1 OS Arabidopsis thaliana GN SULTR3 1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXS2|SUT33_ARATH 34 184 + 151 Gaps:17 26.62 631 44.05 2e-41 Probable sulfate transporter 3.3 OS Arabidopsis thaliana GN SULTR3 3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LW86|SUT34_ARATH 21 184 + 164 Gaps:17 27.72 653 40.33 2e-41 Probable sulfate transporter 3.4 OS Arabidopsis thaliana GN SULTR3 4 PE 2 SV 1
blastp_uniprot_sprot sp|O04289|SUT32_ARATH 35 184 + 150 Gaps:18 26.01 646 44.05 2e-36 Sulfate transporter 3.2 OS Arabidopsis thaliana GN SULTR3 2 PE 2 SV 1
blastp_uniprot_sprot sp|O04722|SUT21_ARATH 53 184 + 132 Gaps:18 22.16 677 50.00 3e-36 Sulfate transporter 2.1 OS Arabidopsis thaliana GN SULTR2 1 PE 2 SV 1
rpsblast_cdd gnl|CDD|162054 84 184 + 101 Gaps:17 20.96 563 47.46 1e-33 TIGR00815 sulP high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria fungi plants and animals. Many organisms including Bacillus subtilis Synechocystis sp Saccharomyces cerevisiae Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized and all are sulfate uptake transporters. Some transport their substrate with high affinities while others transport it with relatively low affinities. Most function by SO42- :H+symport but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis a second bears two proteins one from M. tuberculosis the other from Synechocystis sp and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
rpsblast_cdd gnl|CDD|205965 83 148 + 66 Gaps:17 100.00 83 44.58 4e-21 pfam13792 Sulfate_tra_GLY Sulfate transporter N-terminal domain with GLY motif. This domain is found usually at the N-terminus of sulfate-transporter proteins. It carries a highly conserved GLY sequence motif but the function of the domain is not known.
rpsblast_cdd gnl|CDD|31004 83 184 + 102 Gaps:23 20.40 554 30.97 3e-12 COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|35457 27 184 + 158 Gaps:23 27.22 665 33.70 1e-27 KOG0236 KOG0236 KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 24 183 160 PTHR11814:SF65 none none IPR030314
Phobius 72 89 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 132 149 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 100 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 183 185 3 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 150 160 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 161 182 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 71 71 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 101 125 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 115 147 33 PF13792 none Sulfate transporter N-terminal domain with GLY motif IPR030402
PANTHER 24 183 160 PTHR11814 "Reactome:REACT_15518";signature_desc=SULFATE TRANSPORTER none IPR001902
Phobius 126 131 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

4 Localization

Analysis Start End Length
TMHMM 103 125 22
TMHMM 164 182 18
TMHMM 71 88 17
TMHMM 132 149 17

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5

0 Targeting