Protein : Qrob_P0217120.2 Q. robur
Protein Identifier  ? Qrob_P0217120.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K04078 - chaperonin GroES Gene Prediction Quality  validated
Protein length 

Sequence

Length: 207  
Kegg Orthology  K04078
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100804915 41 199 + 159 Gaps:26 73.71 251 62.70 1e-68 20 kDa chaperonin chloroplastic-like
blastp_kegg lcl|gmx:100814751 41 199 + 159 Gaps:26 73.12 253 62.16 4e-68 uncharacterized LOC100814751
blastp_kegg lcl|vvi:100267892 41 199 + 159 Gaps:26 73.71 251 62.16 1e-67 20 kDa chaperonin chloroplastic-like
blastp_kegg lcl|tcc:TCM_037485 41 199 + 159 Gaps:26 72.27 256 59.46 2e-67 Chaperonin 20 isoform 1
blastp_kegg lcl|rcu:RCOM_0710470 41 199 + 159 Gaps:26 73.12 253 59.46 3e-67 groes chaperonin putative
blastp_kegg lcl|mtr:MTR_4g124910 41 199 + 159 Gaps:26 73.12 253 60.54 3e-67 20 kDa chaperonin
blastp_kegg lcl|cit:102629283 41 199 + 159 Gaps:26 73.41 252 58.92 3e-67 20 kDa chaperonin chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_009G224900g 41 199 + 159 Gaps:27 73.90 249 63.59 4e-67 hypothetical protein
blastp_kegg lcl|vvi:100232962 41 199 + 159 Gaps:26 73.71 251 60.00 4e-67 CPN21 chloroplast chaperonin 21
blastp_kegg lcl|gmx:100803033 41 199 + 159 Gaps:26 73.12 253 61.62 4e-67 20 kDa chaperonin chloroplastic-like
blastp_pdb 1wnr_G 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_F 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_E 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_D 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_C 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_B 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wnr_A 41 125 + 85 Gaps:1 91.49 94 36.05 3e-12 mol:protein length:94 10 kDa chaperonin
blastp_pdb 1wf4_u 41 125 + 85 Gaps:1 86.00 100 36.05 4e-12 mol:protein length:100 Cpn10(GroES)
blastp_pdb 1wf4_t 41 125 + 85 Gaps:1 86.00 100 36.05 4e-12 mol:protein length:100 Cpn10(GroES)
blastp_pdb 1wf4_s 41 125 + 85 Gaps:1 86.00 100 36.05 4e-12 mol:protein length:100 Cpn10(GroES)
blastp_uniprot_sprot sp|O65282|CH10C_ARATH 41 199 + 159 Gaps:26 73.12 253 55.14 7e-60 20 kDa chaperonin chloroplastic OS Arabidopsis thaliana GN CPN21 PE 1 SV 2
blastp_uniprot_sprot sp|Q02073|CH10C_SPIOL 9 199 + 191 Gaps:28 85.10 255 48.85 1e-53 20 kDa chaperonin chloroplastic OS Spinacia oleracea GN CPN21 PE 2 SV 1
blastp_uniprot_sprot sp|B0K3P5|CH10_THEPX 41 125 + 85 none 90.43 94 41.18 4e-17 10 kDa chaperonin OS Thermoanaerobacter sp. (strain X514) GN groS PE 3 SV 1
blastp_uniprot_sprot sp|B0KBR4|CH10_THEP3 41 125 + 85 none 90.43 94 41.18 4e-17 10 kDa chaperonin OS Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN groS PE 3 SV 1
blastp_uniprot_sprot sp|Q60023|CH10_THEBR 41 125 + 85 none 90.43 94 41.18 5e-17 10 kDa chaperonin OS Thermoanaerobacter brockii GN groS PE 1 SV 1
blastp_uniprot_sprot sp|B2A5V2|CH10_NATTJ 41 125 + 85 Gaps:1 90.53 95 46.51 7e-17 10 kDa chaperonin OS Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN groS PE 3 SV 1
blastp_uniprot_sprot sp|Q9XCB0|CH10_RHOMR 41 127 + 87 none 87.00 100 40.23 1e-16 10 kDa chaperonin OS Rhodothermus marinus GN groS PE 3 SV 1
blastp_uniprot_sprot sp|B4SEN0|CH10_PELPB 41 124 + 84 Gaps:1 89.47 95 45.88 1e-16 10 kDa chaperonin OS Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN groS PE 3 SV 1
blastp_uniprot_sprot sp|B3QPB6|CH10_CHLP8 41 124 + 84 Gaps:1 89.47 95 45.88 2e-16 10 kDa chaperonin OS Chlorobaculum parvum (strain NCIB 8327) GN groS PE 3 SV 1
blastp_uniprot_sprot sp|Q8R5T8|CH10_THETN 41 125 + 85 none 90.43 94 40.00 2e-16 10 kDa chaperonin OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN groS PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 73 200 128 PTHR10772 none none IPR020818
SUPERFAMILY 42 125 84 SSF50129 none none IPR011032
SMART 131 198 68 SM00883 none Chaperonin 10 Kd subunit IPR020818
SMART 40 124 85 SM00883 none Chaperonin 10 Kd subunit IPR020818
PANTHER 73 200 128 PTHR10772:SF0 none none none
PRINTS 56 77 22 PR00297 none 10kDa chaperonin signature IPR020818
PRINTS 90 102 13 PR00297 none 10kDa chaperonin signature IPR020818
PRINTS 111 124 14 PR00297 none 10kDa chaperonin signature IPR020818
Pfam 38 123 86 PF00166 none Chaperonin 10 Kd subunit IPR020818
Pfam 142 197 56 PF00166 none Chaperonin 10 Kd subunit IPR020818
SUPERFAMILY 131 198 68 SSF50129 none none IPR011032
Gene3D 44 125 82 G3DSA:2.30.33.40 none none IPR020818
Gene3D 142 198 57 G3DSA:2.30.33.40 none none IPR020818

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting