Protein : Qrob_P0216930.2 Q. robur
Protein Identifier  ? Qrob_P0216930.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) 3.6.4.2 - Dynein ATPase. Code Enzyme  EC:3.6.4.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 162  
Kegg Orthology  K10418
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005875 microtubule associated complex Any multimeric complex connected to a microtubule.
GO:0007017 microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103416777 1 116 + 116 Gaps:8 90.76 119 75.00 7e-47 dynein light chain 2 cytoplasmic-like
blastp_kegg lcl|mdm:103403738 1 116 + 116 Gaps:8 90.76 119 75.00 7e-47 dynein light chain 2 cytoplasmic
blastp_kegg lcl|pxb:103943678 1 116 + 116 Gaps:8 90.76 119 74.07 4e-46 dynein light chain 2 cytoplasmic
blastp_kegg lcl|mdm:103452887 1 116 + 116 Gaps:8 90.76 119 74.07 6e-46 dynein light chain 2 cytoplasmic-like
blastp_kegg lcl|pmum:103323035 1 116 + 116 Gaps:8 90.76 119 72.22 2e-44 dynein light chain 2 cytoplasmic
blastp_kegg lcl|pper:PRUPE_ppa013502mg 1 116 + 116 Gaps:8 90.76 119 72.22 2e-44 hypothetical protein
blastp_kegg lcl|gmx:100777142 1 116 + 116 Gaps:9 90.98 122 63.96 4e-40 dynein light chain 2 cytoplasmic-like
blastp_kegg lcl|fve:101314649 1 116 + 116 Gaps:9 90.83 120 65.14 6e-39 dynein light chain 1 cytoplasmic-like
blastp_kegg lcl|cmo:103497840 1 116 + 116 Gaps:10 90.60 117 66.04 2e-38 dynein light chain 1 cytoplasmic
blastp_kegg lcl|cic:CICLE_v10007063mg 1 116 + 116 Gaps:9 90.68 118 63.55 8e-38 hypothetical protein
blastp_pdb 3glw_A 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 3fm7_F 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 3fm7_E 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 3e2b_A 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 3bri_A 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 2p2t_A 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 1rhw_A 36 122 + 87 Gaps:4 93.26 89 50.60 1e-24 mol:protein length:89 Dynein light chain 1 cytoplasmic
blastp_pdb 3dvt_F 36 122 + 87 Gaps:4 91.21 91 50.60 1e-24 mol:protein length:91 Dynein light chain 1 cytoplasmic
blastp_pdb 3dvt_E 36 122 + 87 Gaps:4 91.21 91 50.60 1e-24 mol:protein length:91 Dynein light chain 1 cytoplasmic
blastp_pdb 3dvt_D 36 122 + 87 Gaps:4 91.21 91 50.60 1e-24 mol:protein length:91 Dynein light chain 1 cytoplasmic
blastp_uniprot_sprot sp|Q24117|DYL1_DROME 36 122 + 87 Gaps:4 93.26 89 50.60 5e-24 Dynein light chain 1 cytoplasmic OS Drosophila melanogaster GN ctp PE 1 SV 1
blastp_uniprot_sprot sp|Q39580|DYL1_CHLRE 39 122 + 84 Gaps:4 87.91 91 52.50 1e-23 Dynein 8 kDa light chain flagellar outer arm OS Chlamydomonas reinhardtii PE 1 SV 1
blastp_uniprot_sprot sp|Q22799|DYL1_CAEEL 38 122 + 85 Gaps:4 91.01 89 51.85 2e-23 Dynein light chain 1 cytoplasmic OS Caenorhabditis elegans GN dlc-1 PE 1 SV 1
blastp_uniprot_sprot sp|P63170|DYL1_RAT 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Rattus norvegicus GN Dynll1 PE 1 SV 1
blastp_uniprot_sprot sp|P63169|DYL1_RABIT 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Oryctolagus cuniculus GN DYNLL1 PE 1 SV 1
blastp_uniprot_sprot sp|P63168|DYL1_MOUSE 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Mus musculus GN Dynll1 PE 1 SV 1
blastp_uniprot_sprot sp|P61273|DYL1_MACFA 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Macaca fascicularis GN DYNLL1 PE 3 SV 1
blastp_uniprot_sprot sp|P63167|DYL1_HUMAN 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Homo sapiens GN DYNLL1 PE 1 SV 1
blastp_uniprot_sprot sp|P61285|DYL1_BOVIN 38 122 + 85 Gaps:4 91.01 89 50.62 2e-23 Dynein light chain 1 cytoplasmic OS Bos taurus GN DYNLL1 PE 1 SV 1
blastp_uniprot_sprot sp|O96860|DYL2_DROME 36 122 + 87 Gaps:4 93.26 89 50.60 2e-23 Dynein light chain 2 cytoplasmic OS Drosophila melanogaster GN Cdlc2 PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 103 103 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 38 110 73 SSF54648 none none none
Phobius 121 131 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 38 107 70 G3DSA:3.30.740.10 none none IPR001372
Phobius 132 156 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 39 101 63 PF01221 none Dynein light chain type 1 IPR001372
PANTHER 39 97 59 PTHR11886 none none IPR001372
Phobius 157 161 5 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 104 120 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 130 152 22
TMHMM 103 120 17

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting