Protein : Qrob_P0216870.2 Q. robur
Protein Identifier  ? Qrob_P0216870.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) 1.3.3.3 - Coproporphyrinogen oxidase. Code Enzyme  EC:1.3.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 204  
Kegg Orthology  K00228
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006779 porphyrin-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO:0004109 coproporphyrinogen oxidase activity Catalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011903mg 3 190 + 188 Gaps:12 45.57 395 72.22 4e-63 hypothetical protein
blastp_kegg lcl|cit:102614806 3 190 + 188 Gaps:12 45.57 395 72.22 9e-63 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|eus:EUTSA_v10007888mg 52 190 + 139 Gaps:5 35.14 387 77.21 9e-62 hypothetical protein
blastp_kegg lcl|vvi:100243271 12 190 + 179 Gaps:18 46.13 401 60.54 2e-60 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|ath:AT4G03205 15 190 + 176 Gaps:15 69.96 233 66.26 4e-60 hemf2 coproporphyrinogen III oxidase 2
blastp_kegg lcl|crb:CARUB_v10003781mg 60 190 + 131 Gaps:6 37.80 336 77.95 1e-59 hypothetical protein
blastp_kegg lcl|cam:101494025 20 190 + 171 Gaps:25 43.72 398 63.22 2e-59 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_008G289900g 7 190 + 184 Gaps:14 44.62 390 63.22 3e-58 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0902640 23 190 + 168 Gaps:15 39.44 393 69.68 4e-58 coproporphyrinogen III oxidase putative (EC:1.3.3.3)
blastp_kegg lcl|aly:ARALYDRAFT_887500 52 190 + 139 Gaps:4 35.40 387 75.18 4e-57 coproporphyrinogen III oxidase
blastp_pdb 2aex_A 99 190 + 92 Gaps:3 27.46 346 46.32 4e-19 mol:protein length:346 Coproporphyrinogen III oxidase mitochondrial
blastp_pdb 1txn_B 89 178 + 90 Gaps:2 27.44 328 41.11 1e-13 mol:protein length:328 Coproporphyrinogen III oxidase
blastp_pdb 1txn_A 89 178 + 90 Gaps:2 27.44 328 41.11 1e-13 mol:protein length:328 Coproporphyrinogen III oxidase
blastp_pdb 1tk1_A 99 178 + 80 Gaps:2 30.77 260 45.00 2e-13 mol:protein length:260 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_W 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_U 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_S 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_Q 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_D 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_A 99 178 + 80 Gaps:2 24.54 326 45.00 3e-13 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_uniprot_sprot sp|Q93Z96|HEM62_ARATH 15 190 + 176 Gaps:15 69.96 233 66.26 2e-61 Coproporphyrinogen-III oxidase 2 chloroplastic OS Arabidopsis thaliana GN CPX2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LR75|HEM61_ARATH 52 190 + 139 Gaps:5 35.23 386 75.74 3e-58 Coproporphyrinogen-III oxidase 1 chloroplastic OS Arabidopsis thaliana GN CPX1 PE 2 SV 1
blastp_uniprot_sprot sp|P35055|HEM6_SOYBN 60 190 + 131 Gaps:8 32.47 385 76.00 8e-58 Coproporphyrinogen-III oxidase chloroplastic OS Glycine max GN CPX PE 1 SV 1
blastp_uniprot_sprot sp|Q42946|HEM6_TOBAC 1 190 + 190 Gaps:11 46.10 397 59.56 2e-51 Coproporphyrinogen-III oxidase chloroplastic OS Nicotiana tabacum GN CPX PE 2 SV 1
blastp_uniprot_sprot sp|Q7XPL2|HEM6_ORYSJ 60 190 + 131 Gaps:16 33.33 399 66.17 3e-46 Coproporphyrinogen-III oxidase chloroplastic OS Oryza sativa subsp. japonica GN CPX PE 2 SV 2
blastp_uniprot_sprot sp|Q42840|HEM6_HORVU 64 190 + 127 Gaps:14 32.48 391 60.63 6e-34 Coproporphyrinogen-III oxidase chloroplastic OS Hordeum vulgare GN CPX PE 2 SV 1
blastp_uniprot_sprot sp|Q9V3D2|HEM6_DROME 98 190 + 93 Gaps:3 24.62 390 50.00 4e-20 Coproporphyrinogen-III oxidase OS Drosophila melanogaster GN Coprox PE 1 SV 1
blastp_uniprot_sprot sp|P36551|HEM6_HUMAN 99 190 + 92 Gaps:3 20.93 454 46.32 1e-17 Coproporphyrinogen-III oxidase mitochondrial OS Homo sapiens GN CPOX PE 1 SV 3
blastp_uniprot_sprot sp|Q8DL15|HEM6_THEEB 90 167 + 78 Gaps:1 23.37 338 46.84 2e-17 Coproporphyrinogen-III oxidase aerobic OS Thermosynechococcus elongatus (strain BP-1) GN hemF PE 3 SV 2
blastp_uniprot_sprot sp|Q3B7D0|HEM6_RAT 99 190 + 92 Gaps:3 21.44 443 46.32 8e-17 Coproporphyrinogen-III oxidase mitochondrial OS Rattus norvegicus GN Cpox PE 2 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 96 188 93 SSF102886 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" none IPR001260
PRINTS 125 141 17 PR00073 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coprogen oxidase signature IPR001260
PRINTS 142 163 22 PR00073 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coprogen oxidase signature IPR001260
Pfam 102 179 78 PF01218 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coproporphyrinogen III oxidase IPR001260
PANTHER 54 190 137 PTHR10755:SF0 none none none
PANTHER 54 190 137 PTHR10755 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251";signature_desc=COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL none IPR001260
Gene3D 94 189 96 G3DSA:3.40.1500.10 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" none IPR001260

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting