Protein : Qrob_P0216530.2 Q. robur
Protein Identifier  ? Qrob_P0216530.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=10) KOG0054//KOG0055//KOG0056//KOG0057//KOG0058//KOG0059//KOG0061//KOG0065 - Multidrug resistance-associated protein/mitoxantrone resistance protein ABC superfamily [Secondary metabolites biosynthesis transport and catabolism]. // Multidrug/pheromone exporter ABC superfamily [Secondary metabolites biosynthesis transport and catabolism]. // Heavy metal exporter HMT1 ABC superfamily [Inorganic ion transport and metabolism]. // Mitochondrial Fe/S cluster exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport]. // Peptide exporter ABC superfamily [Intracellular trafficking secretion and vesicular transport]. // Lipid exporter ABCA1 and related proteins ABC superfamily [Lipid transport and metabolism General function prediction only]. // Transporter ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis transport and catabolism]. // Pleiotropic drug resistance proteins (PDR1-15) ABC superfamily [Secondary metabolites biosynthesis transport and catabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1431  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000229mg 28 1430 + 1403 Gaps:37 99.09 1429 79.31 0.0 hypothetical protein
blastp_kegg lcl|fve:101295128 1 1430 + 1430 Gaps:44 100.00 1430 78.88 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|pmum:103323277 28 1430 + 1403 Gaps:37 99.09 1429 78.81 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|mdm:103452737 28 1430 + 1403 Gaps:31 99.09 1423 78.37 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|vvi:100263041 1 1430 + 1430 Gaps:36 96.51 1492 76.81 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|pxb:103950308 28 1430 + 1403 Gaps:31 99.09 1423 77.80 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|pop:POPTR_0010s16340g 1 1430 + 1430 Gaps:66 100.00 1456 75.69 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10004151mg 1 1430 + 1430 Gaps:53 100.00 1419 76.74 0.0 hypothetical protein
blastp_kegg lcl|gmx:100779615 1 1430 + 1430 Gaps:47 100.00 1437 74.32 0.0 pleiotropic drug resistance protein 3-like
blastp_kegg lcl|gmx:100819411 1 1430 + 1430 Gaps:45 100.00 1435 74.43 0.0 pleiotropic drug resistance protein 3-like
blastp_pdb 3g61_B 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_A 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_B 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_A 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_B 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_A 851 1060 + 210 Gaps:14 16.36 1284 30.00 1e-11 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 4a82_D 850 1065 + 216 Gaps:25 36.16 578 30.14 2e-11 mol:protein length:578 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
blastp_pdb 4a82_C 850 1065 + 216 Gaps:25 36.16 578 30.14 2e-11 mol:protein length:578 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
blastp_pdb 4a82_B 850 1065 + 216 Gaps:25 36.16 578 30.14 2e-11 mol:protein length:578 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
blastp_pdb 4a82_A 850 1065 + 216 Gaps:25 36.16 578 30.14 2e-11 mol:protein length:578 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
blastp_uniprot_sprot sp|Q5W274|PDR3_TOBAC 1 1430 + 1430 Gaps:43 99.03 1447 65.81 0.0 Pleiotropic drug resistance protein 3 OS Nicotiana tabacum GN PDR3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFH0|AB37G_ARATH 1 1430 + 1430 Gaps:48 99.03 1450 61.00 0.0 ABC transporter G family member 37 OS Arabidopsis thaliana GN ABCG37 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUT8|AB33G_ARATH 22 1430 + 1409 Gaps:46 99.01 1413 61.62 0.0 ABC transporter G family member 33 OS Arabidopsis thaliana GN ABCG33 PE 2 SV 1
blastp_uniprot_sprot sp|Q7PC83|AB41G_ARATH 29 1430 + 1402 Gaps:64 98.35 1397 60.26 0.0 ABC transporter G family member 41 OS Arabidopsis thaliana GN ABCG41 PE 2 SV 1
blastp_uniprot_sprot sp|Q7PC82|AB42G_ARATH 30 1430 + 1401 Gaps:66 98.49 1392 60.76 0.0 ABC transporter G family member 42 OS Arabidopsis thaliana GN ABCG42 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GZ52|AB30G_ARATH 23 1430 + 1408 Gaps:63 98.64 1400 59.02 0.0 ABC transporter G family member 30 OS Arabidopsis thaliana GN ABCG30 PE 2 SV 2
blastp_uniprot_sprot sp|Q7PC81|AB43G_ARATH 31 1430 + 1400 Gaps:66 98.56 1390 60.66 0.0 ABC transporter G family member 43 OS Arabidopsis thaliana GN ABCG43 PE 3 SV 1
blastp_uniprot_sprot sp|Q7PC86|AB35G_ARATH 29 1430 + 1402 Gaps:53 97.02 1442 56.40 0.0 ABC transporter G family member 35 OS Arabidopsis thaliana GN ABCG35 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XIE2|AB36G_ARATH 31 1430 + 1400 Gaps:51 96.87 1469 55.24 0.0 ABC transporter G family member 36 OS Arabidopsis thaliana GN ABCG36 PE 1 SV 1
blastp_uniprot_sprot sp|Q5Z9S8|PDR12_ORYSJ 31 1430 + 1400 Gaps:73 96.47 1500 53.35 0.0 Pleiotropic drug resistance protein 12 OS Oryza sativa subsp. japonica GN PDR12 PE 2 SV 1

43 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 541 551 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1195 1213 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 770 1175 406 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 1156 1369 214 PF01061 none ABC-2 type transporter IPR013525
Pfam 502 711 210 PF01061 none ABC-2 type transporter IPR013525
Phobius 588 621 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1313 1318 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1214 1233 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 552 576 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1319 1339 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1234 1263 30 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1340 1399 60 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 168 421 254 SSF52540 none none IPR027417
Gene3D 166 411 246 G3DSA:3.40.50.300 none none IPR027417
Phobius 683 741 59 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 577 587 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 661 682 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 86 735 650 PTHR19241 none none none
Phobius 1176 1194 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 826 1430 605 PTHR19241 none none none
SUPERFAMILY 846 1064 219 SSF52540 none none IPR027417
Phobius 1290 1312 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 180 399 220 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 867 1059 193 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Pfam 858 1010 153 PF00005 none ABC transporter IPR003439
Pfam 171 319 149 PF00005 none ABC transporter IPR003439
Phobius 1400 1422 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 742 769 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1264 1284 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 830 1082 253 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439

12 Localization

Analysis Start End Length
TMHMM 744 766 22
TMHMM 1319 1341 22
TMHMM 1176 1195 19
TMHMM 516 538 22
TMHMM 632 654 22
TMHMM 661 683 22
TMHMM 548 567 19
TMHMM 1290 1312 22
TMHMM 1210 1232 22
TMHMM 1253 1275 22
TMHMM 1400 1422 22
TMHMM 588 610 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting