Protein : Qrob_P0216320.2 Q. robur
Protein Identifier  ? Qrob_P0216320.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR21262//PTHR21262:SF9 - GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 575  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0015969 guanosine tetraphosphate metabolic process The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100263094 52 573 + 522 Gaps:1 89.83 580 82.34 0.0 guanosine-3' 5'-bis(diphosphate) 3'-pyrophosphohydrolase-like
blastp_kegg lcl|fve:101293389 58 574 + 517 Gaps:3 89.46 579 75.87 0.0 guanosine-3' 5'-bis(diphosphate) 3'-pyrophosphohydrolase-like
blastp_kegg lcl|pmum:103323297 1 572 + 572 Gaps:18 98.09 577 74.56 0.0 uncharacterized LOC103323297
blastp_kegg lcl|gmx:100778006 14 574 + 561 Gaps:14 94.82 579 74.68 0.0 uncharacterized LOC100778006
blastp_kegg lcl|pvu:PHAVU_003G121500g 10 574 + 565 Gaps:15 95.49 576 73.82 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1003770 65 574 + 510 Gaps:3 97.88 518 81.46 0.0 guanosine-3' 5'-bis(diphosphate) 3'-pyrophosphohydrolase putative (EC:3.1.7.2)
blastp_kegg lcl|mdm:103452613 8 572 + 565 Gaps:27 93.13 582 74.91 0.0 uncharacterized LOC103452613
blastp_kegg lcl|mtr:MTR_4g123930 45 574 + 530 Gaps:1 91.21 580 74.48 0.0 GTP pyrophosphokinase
blastp_kegg lcl|pxb:103944695 8 572 + 565 Gaps:27 93.13 582 74.54 0.0 probable GTP diphosphokinase CRSH chloroplastic
blastp_kegg lcl|cic:CICLE_v10004629mg 13 574 + 562 Gaps:6 97.92 576 75.35 0.0 hypothetical protein
blastp_pdb 1vj7_B 107 462 + 356 Gaps:24 84.99 393 31.74 1e-38 mol:protein length:393 Bifunctional RELA/SPOT
blastp_pdb 1vj7_A 107 462 + 356 Gaps:24 84.99 393 31.74 1e-38 mol:protein length:393 Bifunctional RELA/SPOT
blastp_pdb 2opo_D 475 538 + 64 Gaps:1 75.58 86 40.00 2e-06 mol:protein length:86 Polcalcin Che a 3
blastp_pdb 2opo_C 475 538 + 64 Gaps:1 75.58 86 40.00 2e-06 mol:protein length:86 Polcalcin Che a 3
blastp_pdb 2opo_B 475 538 + 64 Gaps:1 75.58 86 40.00 2e-06 mol:protein length:86 Polcalcin Che a 3
blastp_pdb 2opo_A 475 538 + 64 Gaps:1 75.58 86 40.00 2e-06 mol:protein length:86 Polcalcin Che a 3
blastp_pdb 1k9u_B 477 536 + 60 Gaps:1 78.21 78 37.70 4e-06 mol:protein length:78 Polcalcin Phl p 7
blastp_pdb 1k9u_A 477 536 + 60 Gaps:1 78.21 78 37.70 4e-06 mol:protein length:78 Polcalcin Phl p 7
blastp_pdb 1h4b_A 479 538 + 60 Gaps:1 72.62 84 40.98 6e-06 mol:protein length:84 POLCALCIN BET V 4
blastp_uniprot_sprot sp|O51216|SPOT_BORBU 74 436 + 363 Gaps:23 50.97 667 32.65 7e-43 Guanosine-3' 5'-bis(diphosphate) 3'-pyrophosphohydrolase OS Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN spoT PE 3 SV 1
blastp_uniprot_sprot sp|Q8CS97|RELA_STAES 77 460 + 384 Gaps:24 49.66 729 31.49 2e-41 GTP pyrophosphokinase OS Staphylococcus epidermidis (strain ATCC 12228) GN relA PE 3 SV 1
blastp_uniprot_sprot sp|Q5HNR8|RELA_STAEQ 77 460 + 384 Gaps:24 49.66 729 31.49 2e-41 GTP pyrophosphokinase OS Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN relA PE 3 SV 1
blastp_uniprot_sprot sp|O54408|RELA_BACSU 115 445 + 331 Gaps:31 42.23 734 35.16 2e-39 GTP pyrophosphokinase OS Bacillus subtilis (strain 168) GN relA PE 3 SV 3
blastp_uniprot_sprot sp|Q931Q4|RELA_STAAM 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus (strain Mu50 / ATCC 700699) GN relA PE 3 SV 2
blastp_uniprot_sprot sp|P0A0E9|RELA_STAAW 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus (strain MW2) GN relA PE 3 SV 1
blastp_uniprot_sprot sp|P0A0F0|RELA_STAAU 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus GN relA PE 3 SV 1
blastp_uniprot_sprot sp|Q6G8T5|RELA_STAAS 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus (strain MSSA476) GN relA PE 3 SV 1
blastp_uniprot_sprot sp|Q99TL8|RELA_STAAN 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus (strain N315) GN relA PE 1 SV 2
blastp_uniprot_sprot sp|Q6GG70|RELA_STAAR 77 460 + 384 Gaps:24 49.18 736 30.94 7e-39 GTP pyrophosphokinase OS Staphylococcus aureus (strain MRSA252) GN relA PE 3 SV 1
rpsblast_cdd gnl|CDD|30665 113 461 + 349 Gaps:26 47.50 701 35.14 6e-54 COG0317 SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 511 543 33 PS50222 none EF-hand calcium-binding domain profile. IPR002048
ProSitePatterns 487 499 13 PS00018 none EF-hand calcium-binding domain. IPR018247
PANTHER 15 573 559 PTHR21262:SF9 none none none
Gene3D 463 538 76 G3DSA:1.10.238.10 none none IPR011992
SMART 315 439 125 SM00954 none Region found in RelA / SpoT proteins IPR007685
Pfam 113 248 136 PF13328 none HD domain none
SUPERFAMILY 254 462 209 SSF81301 none none none
SUPERFAMILY 78 264 187 SSF109604 none none none
ProSitePatterns 521 533 13 PS00018 none EF-hand calcium-binding domain. IPR018247
SMART 512 540 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 478 506 29 SM00054 none EF-hand, calcium binding motif IPR002048
Pfam 315 437 123 PF04607 none Region found in RelA / SpoT proteins IPR007685
PANTHER 15 573 559 PTHR21262 none none none
SUPERFAMILY 463 540 78 SSF47473 none none none
Pfam 481 533 53 PF13499 none EF-hand domain pair IPR011992
ProSiteProfiles 474 509 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 268 418 151 G3DSA:3.30.460.10 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting