Protein : Qrob_P0215930.2 Q. robur
Protein Identifier  ? Qrob_P0215930.2 Organism . Name  Quercus robur
Score  28.0 Score Type  egn
Protein Description  (M=20) K00025 - malate dehydrogenase [EC:1.1.1.37] Code Enzyme  EC:1.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 247  
Kegg Orthology  K00025
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006108 malate metabolic process The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
GO:0016615 malate dehydrogenase activity Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10021075mg 78 223 + 146 Gaps:61 61.75 332 53.17 1e-55 hypothetical protein
blastp_kegg lcl|cit:102615934 48 223 + 176 Gaps:67 62.57 366 49.34 3e-55 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|rcu:RCOM_0400230 78 223 + 146 Gaps:7 52.26 266 64.75 4e-54 malate dehydrogenase putative (EC:1.1.1.37)
blastp_kegg lcl|vvi:100256452 78 232 + 155 Gaps:64 63.55 332 51.18 2e-53 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|gmx:100783188 78 232 + 155 Gaps:62 56.57 373 49.76 1e-51 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|cam:101501958 78 189 + 112 none 29.40 381 77.68 1e-50 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|csv:101221189 78 189 + 112 none 30.77 364 73.21 2e-49 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|cmo:103483128 78 189 + 112 none 30.77 364 73.21 2e-49 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|ppp:PHYPADRAFT_195276 78 189 + 112 none 33.63 333 75.00 9e-49 hypothetical protein
blastp_kegg lcl|csv:101204387 78 189 + 112 none 33.63 333 73.21 9e-49 malate dehydrogenase cytoplasmic-like
blastp_pdb 3d5t_D 78 207 + 130 Gaps:11 42.60 331 41.84 3e-24 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_C 78 207 + 130 Gaps:11 42.60 331 41.84 3e-24 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_B 78 207 + 130 Gaps:11 42.60 331 41.84 3e-24 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_A 78 207 + 130 Gaps:11 42.60 331 41.84 3e-24 mol:protein length:331 Malate dehydrogenase
blastp_pdb 2cvq_B 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 Malate dehydrogenase
blastp_pdb 2cvq_A 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 Malate dehydrogenase
blastp_pdb 1y7t_B 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 Malate dehydrogenase
blastp_pdb 1y7t_A 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 Malate dehydrogenase
blastp_pdb 1iz9_B 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 MALATE DEHYDROGENASE
blastp_pdb 1iz9_A 78 207 + 130 Gaps:11 43.12 327 41.84 2e-23 mol:protein length:327 MALATE DEHYDROGENASE
blastp_uniprot_sprot sp|O48905|MDHC_MEDSA 78 223 + 146 Gaps:59 61.75 332 49.76 4e-52 Malate dehydrogenase cytoplasmic OS Medicago sativa GN CMDH PE 1 SV 1
blastp_uniprot_sprot sp|Q7XDC8|MDHC_ORYSJ 78 223 + 146 Gaps:59 61.75 332 48.29 3e-50 Malate dehydrogenase cytoplasmic OS Oryza sativa subsp. japonica GN Os10g0478200 PE 1 SV 3
blastp_uniprot_sprot sp|Q08062|MDHC_MAIZE 78 223 + 146 Gaps:59 61.75 332 47.80 5e-50 Malate dehydrogenase cytoplasmic OS Zea mays PE 1 SV 2
blastp_uniprot_sprot sp|O24047|MDHC_MESCR 78 189 + 112 none 33.73 332 71.43 4e-48 Malate dehydrogenase cytoplasmic OS Mesembryanthemum crystallinum GN MDH PE 2 SV 1
blastp_uniprot_sprot sp|P57106|MDHC2_ARATH 78 189 + 112 none 33.73 332 69.64 2e-46 Malate dehydrogenase cytoplasmic 2 OS Arabidopsis thaliana GN At5g43330 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FSF0|MDH_TOBAC 78 189 + 112 none 33.73 332 68.75 2e-46 Malate dehydrogenase OS Nicotiana tabacum GN MD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SML8|MDHC_BETVU 78 189 + 112 none 33.73 332 68.75 3e-46 Malate dehydrogenase cytoplasmic OS Beta vulgaris GN NR1 PE 1 SV 1
blastp_uniprot_sprot sp|P93819|MDHC1_ARATH 78 189 + 112 none 33.73 332 68.75 4e-46 Malate dehydrogenase cytoplasmic 1 OS Arabidopsis thaliana GN At1g04410 PE 1 SV 2
blastp_uniprot_sprot sp|Q7NZ60|MDH_CHRVO 78 207 + 130 Gaps:11 43.25 326 43.26 8e-27 Malate dehydrogenase OS Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN mdh PE 3 SV 1
blastp_uniprot_sprot sp|B2JQD2|MDH_BURP8 78 207 + 130 Gaps:11 43.12 327 43.26 4e-25 Malate dehydrogenase OS Burkholderia phymatum (strain DSM 17167 / STM815) GN mdh PE 3 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 78 195 118 SSF51735 none none none
PANTHER 78 189 112 PTHR23382 "KEGG:00020+1.1.1.37","KEGG:00270+1.1.1.37","KEGG:00620+1.1.1.37","KEGG:00630+1.1.1.37","KEGG:00680+1.1.1.37","KEGG:00710+1.1.1.37","KEGG:00720+1.1.1.37","MetaCyc:PWY-1622","MetaCyc:PWY-5392","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-5913","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7115","MetaCyc:PWY-7383";signature_desc=MALATE DEHYDROGENASE none IPR010945
Pfam 78 183 106 PF00056 none lactate/malate dehydrogenase, NAD binding domain IPR001236
Gene3D 78 188 111 G3DSA:3.40.50.720 none none IPR016040

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting