Protein : Qrob_P0211080.2 Q. robur
Protein Identifier  ? Qrob_P0211080.2 Organism . Name  Quercus robur
Score  86.2 Score Type  egn
Protein Description  (M=27) PF02485 - Core-2/I-Branching enzyme Gene Prediction Quality  validated
Protein length 

Sequence

Length: 209  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100247520 1 176 + 176 Gaps:13 45.38 390 63.28 5e-64 uncharacterized LOC100247520
blastp_kegg lcl|cit:102627900 12 176 + 165 Gaps:6 42.86 399 61.99 2e-63 hypothetical protein
blastp_kegg lcl|pxb:103939820 1 176 + 176 Gaps:21 48.05 410 54.82 1e-60 uncharacterized LOC103939820
blastp_kegg lcl|mdm:103455513 1 176 + 176 Gaps:43 50.47 430 52.07 1e-60 uncharacterized LOC103455513
blastp_kegg lcl|vvi:100252627 37 198 + 162 Gaps:19 46.13 375 56.65 1e-60 uncharacterized LOC100252627
blastp_kegg lcl|pop:POPTR_0008s12260g 4 176 + 173 Gaps:3 45.01 391 59.09 2e-60 POPTRDRAFT_874891 hypothetical protein
blastp_kegg lcl|mdm:103438016 1 176 + 176 Gaps:21 48.05 410 53.30 3e-60 uncharacterized LOC103438016
blastp_kegg lcl|pxb:103937283 1 176 + 176 Gaps:42 50.35 429 51.85 5e-60 uncharacterized LOC103937283
blastp_kegg lcl|pxb:103950632 1 176 + 176 Gaps:42 50.35 429 51.85 5e-60 uncharacterized LOC103950632
blastp_kegg lcl|pop:POPTR_0010s13150g 1 177 + 177 Gaps:1 45.24 389 59.09 1e-58 POPTRDRAFT_566591 hypothetical protein
rpsblast_cdd gnl|CDD|202252 121 174 + 54 Gaps:5 24.38 242 40.68 8e-09 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 49 208 160 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 27 48 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 121 177 57 PF02485 none Core-2/I-Branching enzyme IPR003406
PANTHER 60 176 117 PTHR31042:SF7 none none none
PANTHER 60 176 117 PTHR31042 none none none
Phobius 1 26 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 26 48 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 41   Secretory pathway 5 0.465 0.248 NON-PLANT 41