Protein : Qrob_P0211070.2 Q. robur
Protein Identifier  ? Qrob_P0211070.2 Organism . Name  Quercus robur
Score  98.6 Score Type  egn
Protein Description  (M=27) PF02485 - Core-2/I-Branching enzyme Gene Prediction Quality  validated
Protein length 

Sequence

Length: 217  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103939820 5 216 + 212 Gaps:1 51.46 410 77.73 1e-119 uncharacterized LOC103939820
blastp_kegg lcl|cic:CICLE_v10020320mg 3 216 + 214 Gaps:1 50.84 419 76.06 3e-119 hypothetical protein
blastp_kegg lcl|gmx:100791882 3 216 + 214 Gaps:1 56.50 377 74.65 3e-119 uncharacterized LOC100791882
blastp_kegg lcl|cit:102611796 3 216 + 214 Gaps:1 50.84 419 76.53 7e-119 uncharacterized LOC102611796
blastp_kegg lcl|mtr:MTR_6g083830 3 216 + 214 Gaps:1 50.96 418 76.06 1e-118 hypothetical protein
blastp_kegg lcl|mdm:103415361 3 216 + 214 Gaps:1 73.96 288 73.71 2e-118 uncharacterized LOC103415361
blastp_kegg lcl|vvi:100247520 3 216 + 214 Gaps:1 54.62 390 74.65 3e-118 uncharacterized LOC100247520
blastp_kegg lcl|mdm:103438016 5 216 + 212 Gaps:1 51.46 410 76.78 5e-118 uncharacterized LOC103438016
blastp_kegg lcl|mdm:103455513 5 216 + 212 Gaps:1 49.07 430 75.83 7e-118 uncharacterized LOC103455513
blastp_kegg lcl|gmx:100803748 3 216 + 214 Gaps:1 47.23 451 75.59 9e-118 uncharacterized LOC100803748
rpsblast_cdd gnl|CDD|202252 3 175 + 173 Gaps:10 74.79 242 49.72 1e-54 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 3 174 172 PF02485 none Core-2/I-Branching enzyme IPR003406
PANTHER 5 216 212 PTHR31042 none none none
PANTHER 5 216 212 PTHR31042:SF7 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting