Protein : Qrob_P0208730.2 Q. robur
Protein Identifier  ? Qrob_P0208730.2 Organism . Name  Quercus robur
Protein Description  (M=5) 1.1.1.25 - Shikimate dehydrogenase. Alias (in v1)  Qrob_P0933280.1
Code Enzyme  EC:4.2.1.10, EC:1.1.1.25 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 532  
Kegg Orthology  K13832
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0003855 3-dehydroquinate dehydratase activity Catalysis of the reaction: 3-dehydroquinate = 3-dehydroshikimate + H(2)O.
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103344710 1 531 + 531 Gaps:1 100.00 532 81.77 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|mdm:103434002 1 530 + 530 Gaps:1 99.81 532 80.60 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|vvi:100243536 1 531 + 531 Gaps:2 100.00 531 80.79 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|pxb:103962879 1 531 + 531 Gaps:1 100.00 532 79.89 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|pxb:103934019 1 530 + 530 Gaps:1 99.81 532 80.23 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|pxb:103928352 1 530 + 530 Gaps:1 99.81 532 80.04 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|fve:101311490 1 531 + 531 Gaps:3 100.00 534 79.78 0.0 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0013s03070g 12 531 + 520 Gaps:2 99.81 521 81.35 0.0 POPTRDRAFT_570919 hypothetical protein
blastp_kegg lcl|tcc:TCM_025933 1 531 + 531 Gaps:1 100.00 532 78.38 0.0 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase isoform 1
blastp_kegg lcl|pper:PRUPE_ppa004574mg 31 531 + 501 Gaps:1 100.00 502 82.27 0.0 hypothetical protein
blastp_pdb 2o7s_A 21 529 + 509 Gaps:3 97.90 523 63.87 0.0 mol:protein length:523 Bifunctional 3-dehydroquinate dehydratase/shi
blastp_pdb 2o7q_A 21 529 + 509 Gaps:3 97.90 523 63.87 0.0 mol:protein length:523 Bifunctional 3-dehydroquinate dehydratase/shi
blastp_pdb 2gpt_A 21 529 + 509 Gaps:3 97.90 523 63.87 0.0 mol:protein length:523 3-dehydroquinate dehydratase/ shikimate 5-deh
blastp_pdb 2egg_B 250 529 + 280 Gaps:24 93.60 297 38.13 2e-33 mol:protein length:297 Shikimate 5-dehydrogenase
blastp_pdb 2egg_A 250 529 + 280 Gaps:24 93.60 297 38.13 2e-33 mol:protein length:297 Shikimate 5-dehydrogenase
blastp_pdb 2hk8_H 249 519 + 271 Gaps:34 94.80 269 33.73 6e-30 mol:protein length:269 Shikimate dehydrogenase
blastp_pdb 2hk8_G 249 519 + 271 Gaps:34 94.80 269 33.73 6e-30 mol:protein length:269 Shikimate dehydrogenase
blastp_pdb 2hk8_F 249 519 + 271 Gaps:34 94.80 269 33.73 6e-30 mol:protein length:269 Shikimate dehydrogenase
blastp_pdb 2hk8_E 249 519 + 271 Gaps:34 94.80 269 33.73 6e-30 mol:protein length:269 Shikimate dehydrogenase
blastp_pdb 2hk8_D 249 519 + 271 Gaps:34 94.80 269 33.73 6e-30 mol:protein length:269 Shikimate dehydrogenase
blastp_uniprot_sprot sp|Q9SQT8|DHQSD_ARATH 10 529 + 520 Gaps:4 86.90 603 62.98 0.0 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic OS Arabidopsis thaliana GN EMB3004 PE 1 SV 1
blastp_uniprot_sprot sp|Q6HDI8|AROE_BACHK 254 515 + 262 Gaps:17 92.78 277 40.86 3e-49 Shikimate dehydrogenase OS Bacillus thuringiensis subsp. konkukian (strain 97-27) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|B7JNW6|AROE_BACC0 254 515 + 262 Gaps:17 92.78 277 40.86 5e-49 Shikimate dehydrogenase OS Bacillus cereus (strain AH820) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|Q634K8|AROE_BACCZ 254 515 + 262 Gaps:17 92.78 277 40.86 8e-49 Shikimate dehydrogenase OS Bacillus cereus (strain ZK / E33L) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|C1ESM8|AROE_BACC3 254 515 + 262 Gaps:17 92.78 277 40.47 1e-48 Shikimate dehydrogenase OS Bacillus cereus (strain 03BB102) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|Q818D0|AROE_BACCR 254 527 + 274 Gaps:21 98.56 277 39.19 2e-48 Shikimate dehydrogenase OS Bacillus cereus (strain ATCC 14579 / DSM 31) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|B7HCW1|AROE_BACC4 254 527 + 274 Gaps:21 98.56 277 39.19 2e-48 Shikimate dehydrogenase OS Bacillus cereus (strain B4264) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|A0RIV1|AROE_BACAH 254 515 + 262 Gaps:17 92.78 277 40.47 2e-48 Shikimate dehydrogenase OS Bacillus thuringiensis (strain Al Hakam) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|B9IYA1|AROE_BACCQ 254 515 + 262 Gaps:19 92.78 277 40.86 3e-48 Shikimate dehydrogenase OS Bacillus cereus (strain Q1) GN aroE PE 3 SV 1
blastp_uniprot_sprot sp|B7HPN3|AROE_BACC7 254 515 + 262 Gaps:19 92.78 277 40.86 3e-48 Shikimate dehydrogenase OS Bacillus cereus (strain AH187) GN aroE PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 195 529 335 PTHR21089 none none none
Gene3D 249 356 108 G3DSA:3.40.192.10 none none none
TIGRFAM 26 243 218 TIGR01093 "KEGG:00400+4.2.1.10","MetaCyc:PWY-6163","MetaCyc:PWY-6416","MetaCyc:PWY-6707","UniPathway:UPA00053" aroD: 3-dehydroquinate dehydratase, type I IPR001381
Pfam 376 474 99 PF01488 none Shikimate / quinate 5-dehydrogenase IPR006151
SUPERFAMILY 20 247 228 SSF51569 none none none
Pfam 27 245 219 PF01487 "KEGG:00400+4.2.1.10","MetaCyc:PWY-6163","MetaCyc:PWY-6416","MetaCyc:PWY-6707","UniPathway:UPA00053" Type I 3-dehydroquinase IPR001381
Gene3D 357 529 173 G3DSA:3.40.50.720 none none IPR016040
Gene3D 19 248 230 G3DSA:3.20.20.70 none none IPR013785
Hamap 25 247 223 MF_00214 "KEGG:00400+4.2.1.10","MetaCyc:PWY-6163","MetaCyc:PWY-6416","MetaCyc:PWY-6707","UniPathway:UPA00053" 3-dehydroquinate dehydratase [aroD]. IPR001381
SUPERFAMILY 375 527 153 SSF51735 none none none
PANTHER 195 529 335 PTHR21089:SF1 none none none
SUPERFAMILY 245 350 106 SSF53223 none none none
Hamap 253 529 277 MF_00222 "KEGG:00400+1.1.1.25","MetaCyc:PWY-6163","UniPathway:UPA00053" Shikimate dehydrogenase (NADP(+)) [aroE]. IPR022893
Pfam 258 335 78 PF08501 "KEGG:00400+1.1.1.25","MetaCyc:PWY-6163","UniPathway:UPA00053" Shikimate dehydrogenase substrate binding domain IPR013708

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting