Protein : Qrob_P0208430.2 Q. robur
Protein Identifier  ? Qrob_P0208430.2 Organism . Name  Quercus robur
Protein Description  (M=10) K00384 - thioredoxin reductase (NADPH) [EC:1.8.1.9] Alias (in v1)  Qrob_P0334430.1
Code Enzyme  EC:1.8.1.9 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 388  
Kegg Orthology  K00384
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0004791 thioredoxin-disulfide reductase activity Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
GO:0019430 removal of superoxide radicals Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100263578 47 387 + 341 Gaps:2 90.64 374 84.96 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|ath:AT2G17420 55 387 + 333 Gaps:2 87.57 378 83.69 0.0 NTRA NADPH-dependent thioredoxin reductase A
blastp_kegg lcl|tcc:TCM_000987 48 387 + 340 Gaps:4 89.36 376 81.85 0.0 NADPH-dependent thioredoxin reductase A
blastp_kegg lcl|aly:ARALYDRAFT_319692 55 387 + 333 Gaps:1 87.14 381 82.53 0.0 thioredoxin reductase
blastp_kegg lcl|cam:101506489 52 387 + 336 Gaps:1 91.28 367 81.49 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|pper:PRUPE_ppa007040mg 1 387 + 387 Gaps:4 100.00 385 77.66 0.0 hypothetical protein
blastp_kegg lcl|gmx:100790557 53 387 + 335 Gaps:1 89.78 372 80.84 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|fve:101291563 53 387 + 335 Gaps:2 100.00 333 84.38 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|pmum:103340476 1 387 + 387 Gaps:4 100.00 385 75.32 0.0 thioredoxin reductase NTRB-like
blastp_kegg lcl|cmo:103490638 54 387 + 334 Gaps:3 85.09 389 83.99 0.0 thioredoxin reductase NTRB
blastp_pdb 1vdc_A 53 387 + 335 Gaps:2 100.00 333 82.28 0.0 mol:protein length:333 NADPH DEPENDENT THIOREDOXIN REDUCTASE
blastp_pdb 2whd_B 59 387 + 329 Gaps:6 92.02 351 76.16 2e-170 mol:protein length:351 THIOREDOXIN REDUCTASE
blastp_pdb 2whd_A 59 387 + 329 Gaps:6 92.02 351 76.16 2e-170 mol:protein length:351 THIOREDOXIN REDUCTASE
blastp_pdb 3d8x_B 62 379 + 318 Gaps:12 96.32 326 63.69 1e-142 mol:protein length:326 Thioredoxin reductase 1
blastp_pdb 3d8x_A 62 379 + 318 Gaps:12 96.32 326 63.69 1e-142 mol:protein length:326 Thioredoxin reductase 1
blastp_pdb 3itj_D 59 379 + 321 Gaps:12 93.79 338 63.09 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_C 59 379 + 321 Gaps:12 93.79 338 63.09 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_B 59 379 + 321 Gaps:12 93.79 338 63.09 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_A 59 379 + 321 Gaps:12 93.79 338 63.09 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 2a87_B 63 378 + 316 Gaps:19 89.85 335 52.49 1e-93 mol:protein length:335 Thioredoxin reductase
blastp_uniprot_sprot sp|Q39242|TRXB2_ARATH 55 387 + 333 Gaps:2 86.42 383 83.69 0.0 Thioredoxin reductase 2 OS Arabidopsis thaliana GN NTR2 PE 2 SV 2
blastp_uniprot_sprot sp|Q39243|TRXB1_ARATH 53 387 + 335 Gaps:2 88.80 375 81.98 0.0 Thioredoxin reductase 1 OS Arabidopsis thaliana GN NTR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q6ZFU6|NTRB_ORYSJ 59 387 + 329 Gaps:6 97.58 331 76.16 1e-174 Thioredoxin reductase NTRB OS Oryza sativa subsp. japonica GN NTRB PE 2 SV 1
blastp_uniprot_sprot sp|Q69PS6|NTRA_ORYSJ 59 387 + 329 Gaps:6 87.77 368 77.09 4e-165 Thioredoxin reductase NTRA OS Oryza sativa subsp. japonica GN Os06g0327300 PE 3 SV 2
blastp_uniprot_sprot sp|P29509|TRXB1_YEAST 58 379 + 322 Gaps:12 99.69 319 62.89 1e-142 Thioredoxin reductase 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TRR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q6FR39|TRXB_CANGA 62 379 + 318 Gaps:12 98.43 319 63.38 4e-142 Thioredoxin reductase OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6C7L4|TRXB_YARLI 63 378 + 316 Gaps:12 97.81 319 64.42 2e-140 Thioredoxin reductase OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6HA24|TRXB_KLULA 58 379 + 322 Gaps:12 91.12 349 62.89 3e-140 Thioredoxin reductase mitochondrial OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BIS1|TRXB_DEBHA 58 378 + 321 Gaps:12 98.75 321 61.51 9e-138 Thioredoxin reductase OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q75CM8|TRXB_ASHGO 58 379 + 322 Gaps:12 99.69 319 61.64 1e-137 Thioredoxin reductase OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN TRR1 PE 3 SV 2

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 61 169 109 G3DSA:3.50.50.60 none none none
PANTHER 63 376 314 PTHR22912:SF96 none none none
Pfam 62 354 293 PF07992 none Pyridine nucleotide-disulphide oxidoreductase IPR023753
SUPERFAMILY 60 376 317 SSF51905 none none none
PRINTS 63 82 20 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 213 231 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 329 351 23 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 165 183 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 302 318 17 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PANTHER 63 376 314 PTHR22912 none none none
PRINTS 166 174 9 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 261 277 17 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 339 357 19 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 121 131 11 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 62 84 23 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 100 115 16 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 209 233 25 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 304 325 22 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 192 204 13 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
Pfam 214 278 65 PF00070 none Pyridine nucleotide-disulphide oxidoreductase IPR001327
Gene3D 170 370 201 G3DSA:3.50.50.60 none none none
TIGRFAM 63 376 314 TIGR01292 "KEGG:00240+1.8.1.9","KEGG:00450+1.8.1.9" TRX_reduct: thioredoxin-disulfide reductase IPR005982
ProSitePatterns 199 221 23 PS00573 none Pyridine nucleotide-disulphide oxidoreductases class-II active site. IPR008255

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 27 26

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Mitochondrion 2 0.017 0.921 NON-PLANT 27