Protein : Qrob_P0208240.2 Q. robur
Protein Identifier  ? Qrob_P0208240.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC (PTHR10003:SF34) Code Enzyme  EC:1.15.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 83  
Kegg Orthology  K04565
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
GO:0004784 superoxide dismutase activity Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.
GO:0006801 superoxide metabolic process The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.
GO:0034599 cellular response to oxidative stress Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
GO:0071486 cellular response to high light intensity Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|zma:103639134 1 82 + 82 Gaps:70 100.00 152 48.03 5e-30 superoxide dismutase [Cu-Zn] 4AP
blastp_kegg lcl|zma:542722 1 82 + 82 Gaps:70 100.00 152 48.03 5e-30 sod4 SODCC.2 sod4ap superoxide dismutase4 (EC:1.15.1.1)
blastp_kegg lcl|zma:542377 1 82 + 82 Gaps:70 100.00 152 47.37 8e-29 sod9 SODCC.3 Sod4A superoxide dismutase9 (EC:1.15.1.1)
blastp_kegg lcl|pop:POPTR_0005s04590g 1 82 + 82 Gaps:70 100.00 152 46.71 3e-28 Cu/Zn superoxide dismutase family protein
blastp_kegg lcl|gmx:100499991 1 82 + 82 Gaps:70 100.00 152 46.05 3e-28 SOD1 Superoxide dismutase [Cu-Zn] (EC:1.15.1.1)
blastp_kegg lcl|atr:s00057p00145850 1 82 + 82 Gaps:70 86.36 176 46.05 3e-28 AMTR_s00057p00145850 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G097000g 1 82 + 82 Gaps:70 100.00 152 46.05 7e-28 hypothetical protein
blastp_kegg lcl|vvi:100265553 1 82 + 82 Gaps:63 100.00 145 47.59 1e-27 superoxide dismutase [Cu-Zn]-like
blastp_kegg lcl|csv:101215417 1 82 + 82 Gaps:70 100.00 152 46.05 2e-27 SOD superoxide dismutase [Cu-Zn]-like (EC:1.15.1.1)
blastp_kegg lcl|csv:101224617 1 82 + 82 Gaps:70 100.00 152 46.05 2e-27 superoxide dismutase [Cu-Zn]-like
blastp_pdb 2q2l_B 1 82 + 82 Gaps:70 100.00 152 44.08 2e-27 mol:protein length:152 Superoxide Dismutase
blastp_pdb 2q2l_A 1 82 + 82 Gaps:70 100.00 152 44.08 2e-27 mol:protein length:152 Superoxide Dismutase
blastp_pdb 1srd_D 3 80 + 78 Gaps:70 96.10 154 36.49 2e-18 mol:protein length:154 COPPER ZINC SUPEROXIDE DISMUTASE
blastp_pdb 1srd_C 3 80 + 78 Gaps:70 96.10 154 36.49 2e-18 mol:protein length:154 COPPER ZINC SUPEROXIDE DISMUTASE
blastp_pdb 1srd_B 3 80 + 78 Gaps:70 96.10 154 36.49 2e-18 mol:protein length:154 COPPER ZINC SUPEROXIDE DISMUTASE
blastp_pdb 1srd_A 3 80 + 78 Gaps:70 96.10 154 36.49 2e-18 mol:protein length:154 COPPER ZINC SUPEROXIDE DISMUTASE
blastp_pdb 3f7l_A 2 80 + 79 Gaps:69 97.37 152 37.16 1e-17 mol:protein length:152 Copper Zinc Superoxide Dismutase
blastp_pdb 3f7k_A 2 80 + 79 Gaps:69 97.37 152 37.16 1e-17 mol:protein length:152 Copper Zinc Superoxide Dismutase
blastp_pdb 1to5_D 2 80 + 79 Gaps:71 96.15 156 35.33 1e-17 mol:protein length:156 Superoxide dismutase
blastp_pdb 1to5_C 2 80 + 79 Gaps:71 96.15 156 35.33 1e-17 mol:protein length:156 Superoxide dismutase
blastp_uniprot_sprot sp|P23346|SODC5_MAIZE 1 82 + 82 Gaps:70 100.00 152 48.03 2e-31 Superoxide dismutase [Cu-Zn] 4AP OS Zea mays GN SODCC.2 PE 2 SV 2
blastp_uniprot_sprot sp|P23345|SODC4_MAIZE 1 82 + 82 Gaps:70 100.00 152 48.03 2e-31 Superoxide dismutase [Cu-Zn] 4A OS Zea mays GN SODCC.3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SQL5|SODC_ANACO 1 82 + 82 Gaps:70 100.00 152 46.71 8e-30 Superoxide dismutase [Cu-Zn] OS Ananas comosus GN SOD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7M1R5|SODC_SOYBN 1 82 + 82 Gaps:70 100.00 152 46.05 1e-29 Superoxide dismutase [Cu-Zn] OS Glycine max GN SOD1 PE 3 SV 1
blastp_uniprot_sprot sp|Q07796|SODC_IPOBA 1 82 + 82 Gaps:70 100.00 152 45.39 1e-28 Superoxide dismutase [Cu-Zn] OS Ipomoea batatas GN SODCC PE 2 SV 2
blastp_uniprot_sprot sp|P28757|SODC2_ORYSJ 1 82 + 82 Gaps:70 100.00 152 44.08 2e-28 Superoxide dismutase [Cu-Zn] 2 OS Oryza sativa subsp. japonica GN SODCC2 PE 1 SV 2
blastp_uniprot_sprot sp|P27082|SODC_NICPL 1 82 + 82 Gaps:70 100.00 152 44.74 2e-28 Superoxide dismutase [Cu-Zn] OS Nicotiana plumbaginifolia GN SODCC PE 2 SV 2
blastp_uniprot_sprot sp|Q8L5E0|ALL5B_OLEEU 1 82 + 82 Gaps:70 100.00 152 44.74 3e-28 Superoxide dismutase [Cu-Zn] 2 OS Olea europaea GN OLE5 PE 1 SV 2
blastp_uniprot_sprot sp|O22373|SODC_CAPAN 1 82 + 82 Gaps:70 100.00 152 44.08 6e-28 Superoxide dismutase [Cu-Zn] OS Capsicum annuum GN SODCC PE 2 SV 1
blastp_uniprot_sprot sp|O65768|SODC_CARPA 1 82 + 82 Gaps:70 100.00 152 44.74 1e-27 Superoxide dismutase [Cu-Zn] OS Carica papaya GN SODCC PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 4 11 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 26 59 34 PF00080 "MetaCyc:PWY-6854" Copper/zinc superoxide dismutase (SODC) IPR001424
Gene3D 26 59 34 G3DSA:2.60.40.200 "MetaCyc:PWY-6854" none IPR001424
SUPERFAMILY 1 80 80 SSF49329 "MetaCyc:PWY-6854" none IPR001424
Gene3D 60 80 21 G3DSA:2.60.40.200 "MetaCyc:PWY-6854" none IPR001424
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 26 80 55 PTHR10003:SF34 "MetaCyc:PWY-6854";signature_desc=SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC (PTHR10003:SF34) none IPR031074
Phobius 1 16 16 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 12 16 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSitePatterns 67 78 12 PS00332 "MetaCyc:PWY-6854" Copper/Zinc superoxide dismutase signature 2. IPR018152
PANTHER 26 80 55 PTHR10003 none none none
Phobius 17 82 66 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting