Protein : Qrob_P0207890.2 Q. robur
Protein Identifier  ? Qrob_P0207890.2 Organism . Name  Quercus robur
Score  50.5 Score Type  egn
Protein Description  (M=2) 2.5.1.78 - 6,7-dimethyl-8-ribityllumazine synthase. Code Enzyme  EC:2.5.1.78
Gene Prediction Quality  validated Protein length 

Sequence

Length: 188  
Kegg Orthology  K00794
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009231 riboflavin biosynthetic process The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).
GO:0009349 riboflavin synthase complex An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101510073 1 186 + 186 Gaps:7 81.50 227 67.57 2e-77 6 7-dimethyl-8-ribityllumazine synthase chloroplastic-like
blastp_kegg lcl|vvi:100243902 34 186 + 153 Gaps:7 68.47 222 78.95 2e-73 6 7-dimethyl-8-ribityllumazine synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0292340 41 186 + 146 Gaps:3 67.42 221 78.52 2e-73 6 7-dimethyl-8-ribityllumazine synthase putative (EC:2.5.1.9)
blastp_kegg lcl|pvu:PHAVU_002G189800g 1 186 + 186 Gaps:5 81.50 227 67.03 6e-73 hypothetical protein
blastp_kegg lcl|pxb:103935620 2 186 + 185 Gaps:13 81.20 234 69.47 1e-71 6 7-dimethyl-8-ribityllumazine synthase chloroplastic
blastp_kegg lcl|fve:101305710 5 186 + 182 Gaps:13 78.64 220 69.36 2e-71 6 7-dimethyl-8-ribityllumazine synthase chloroplastic-like
blastp_kegg lcl|gmx:100818483 1 180 + 180 Gaps:6 94.68 188 67.42 2e-69 6 7-dimethyl-8-ribityllumazine synthase chloroplastic-like
blastp_kegg lcl|gmx:100798694 1 183 + 183 Gaps:8 94.39 196 65.95 2e-69 6 7-dimethyl-8-ribityllumazine synthase chloroplastic-like
blastp_kegg lcl|ath:AT2G44050 1 186 + 186 Gaps:19 81.50 227 65.41 2e-68 COS1 6 7-dimethyl-8-ribityllumazine synthase
blastp_kegg lcl|mdm:103456323 61 186 + 126 Gaps:2 54.70 234 82.03 3e-68 6 7-dimethyl-8-ribityllumazine synthase chloroplastic
blastp_pdb 1c2y_T 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_S 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_R 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_Q 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_P 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_O 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_N 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_M 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_L 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_pdb 1c2y_K 75 186 + 112 Gaps:3 72.44 156 68.14 3e-50 mol:protein length:156 PROTEIN (LUMAZINE SYNTHASE)
blastp_uniprot_sprot sp|O80575|RISB_ARATH 1 186 + 186 Gaps:19 81.50 227 65.41 8e-70 6 7-dimethyl-8-ribityllumazine synthase chloroplastic OS Arabidopsis thaliana GN At2g44050 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XH32|RISB_SPIOL 1 186 + 186 Gaps:15 80.63 222 58.66 1e-57 6 7-dimethyl-8-ribityllumazine synthase chloroplastic OS Spinacia oleracea PE 1 SV 1
blastp_uniprot_sprot sp|A5D1C7|RISB_PELTS 77 185 + 109 Gaps:5 67.10 155 50.96 3e-32 6 7-dimethyl-8-ribityllumazine synthase OS Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|A6LSS9|RISB_CLOB8 85 183 + 99 none 64.29 154 49.49 5e-32 6 7-dimethyl-8-ribityllumazine synthase OS Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|B7GKI1|RISB_ANOFW 87 184 + 98 none 63.64 154 54.08 4e-31 6 7-dimethyl-8-ribityllumazine synthase OS Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|C4Z8N0|RISB_EUBR3 80 182 + 103 Gaps:1 66.23 154 52.94 4e-31 6 7-dimethyl-8-ribityllumazine synthase OS Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|Q9CGU6|RISB_LACLA 84 182 + 99 none 64.29 154 49.49 4e-31 6 7-dimethyl-8-ribityllumazine synthase OS Lactococcus lactis subsp. lactis (strain IL1403) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|B7GN04|RISB_BIFLS 86 183 + 98 none 63.23 155 51.02 8e-31 6 7-dimethyl-8-ribityllumazine synthase OS Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|C1CP44|RISB_STRZT 88 182 + 95 none 61.29 155 51.58 2e-30 6 7-dimethyl-8-ribityllumazine synthase OS Streptococcus pneumoniae (strain Taiwan19F-14) GN ribH PE 3 SV 1
blastp_uniprot_sprot sp|C1CI69|RISB_STRZP 88 182 + 95 none 61.29 155 51.58 2e-30 6 7-dimethyl-8-ribityllumazine synthase OS Streptococcus pneumoniae (strain P1031) GN ribH PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 88 179 92 TIGR00114 "KEGG:00740+2.5.1.78","MetaCyc:PWY-6167","MetaCyc:PWY-6168","UniPathway:UPA00275" lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase IPR002180
Gene3D 77 184 108 G3DSA:3.40.50.960 "KEGG:00740+2.5.1.78","MetaCyc:PWY-6167","MetaCyc:PWY-6168","UniPathway:UPA00275" none IPR002180
PANTHER 69 183 115 PTHR21058:SF0 none none none
Pfam 86 183 98 PF00885 "KEGG:00740+2.5.1.78","MetaCyc:PWY-6167","MetaCyc:PWY-6168","UniPathway:UPA00275" 6,7-dimethyl-8-ribityllumazine synthase IPR002180
SUPERFAMILY 80 183 104 SSF52121 "KEGG:00740+2.5.1.78","MetaCyc:PWY-6167","MetaCyc:PWY-6168","UniPathway:UPA00275" none IPR002180
PANTHER 69 183 115 PTHR21058 "KEGG:00740+2.5.1.78","MetaCyc:PWY-6167","MetaCyc:PWY-6168","UniPathway:UPA00275";signature_desc=6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE (DMRL SYNTHASE) (LUMAZINE SYNTHASE) none IPR002180

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 77   Mitochondrion 5 0.057 0.506 NON-PLANT 77