Protein : Qrob_P0207760.2 Q. robur
Protein Identifier  ? Qrob_P0207760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0521//KOG0702//KOG0703//KOG0704//KOG0705//KOG0706//KOG0818//KOG1117 - Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]. // Predicted GTPase-activating protein [Signal transduction mechanisms]. // Predicted GTPase-activating protein [Signal transduction mechanisms]. // ADP-ribosylation factor GTPase activator [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport Cytoskeleton]. // GTPase-activating protein Centaurin gamma (contains Ras-like GTPase PH and ankyrin repeat domains) [Signal transduction mechanisms]. // Predicted GTPase-activating protein [Signal transduction mechanisms]. // GTPase-activating proteins of the GIT family [Signal transduction mechanisms]. // Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms Cytoskeleton]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 479  
Kegg Orthology  K12486
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005096 GTPase activator activity Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326270 1 478 + 478 Gaps:19 100.00 487 73.51 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5
blastp_kegg lcl|pper:PRUPE_ppa004879mg 1 478 + 478 Gaps:19 100.00 487 72.69 0.0 hypothetical protein
blastp_kegg lcl|vvi:100262374 1 477 + 477 Gaps:11 99.79 475 72.57 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|cit:102628167 1 478 + 478 Gaps:60 100.00 516 67.83 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|mdm:103430170 1 477 + 477 Gaps:12 99.79 478 72.75 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5
blastp_kegg lcl|pxb:103934428 1 477 + 477 Gaps:13 99.79 477 70.80 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5
blastp_kegg lcl|pxb:103927397 1 477 + 477 Gaps:12 99.79 478 71.28 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5
blastp_kegg lcl|gmx:100807561 1 478 + 478 Gaps:36 100.00 500 67.80 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|gmx:100780452 1 478 + 478 Gaps:20 100.00 484 69.21 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|pop:POPTR_0001s41720g 1 478 + 478 Gaps:22 100.00 478 70.29 0.0 ARF GAP-like zinc finger-containing protein ZIGA3
blastp_pdb 2iqj_B 14 125 + 112 Gaps:4 86.57 134 50.86 8e-37 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2iqj_A 14 125 + 112 Gaps:4 86.57 134 50.86 8e-37 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2crr_A 9 114 + 106 Gaps:4 78.01 141 52.73 1e-33 mol:protein length:141 Stromal membrane-associated protein SMAP1B
blastp_pdb 3jue_B 28 125 + 98 Gaps:8 28.80 368 47.17 1e-25 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 3jue_A 28 125 + 98 Gaps:8 28.80 368 47.17 1e-25 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 3lju_X 14 123 + 110 Gaps:9 29.79 386 46.09 1e-22 mol:protein length:386 Arf-GAP with dual PH domain-containing protei
blastp_pdb 3feh_A 14 123 + 110 Gaps:9 29.79 386 46.09 1e-22 mol:protein length:386 Centaurin-alpha-1
blastp_pdb 3mdb_D 14 123 + 110 Gaps:9 29.34 392 46.09 1e-22 mol:protein length:392 Arf-GAP with dual PH domain-containing protei
blastp_pdb 3mdb_C 14 123 + 110 Gaps:9 29.34 392 46.09 1e-22 mol:protein length:392 Arf-GAP with dual PH domain-containing protei
blastp_pdb 3fm8_D 14 123 + 110 Gaps:9 29.34 392 46.09 1e-22 mol:protein length:392 Centaurin-alpha-1
blastp_uniprot_sprot sp|Q9FL69|AGD5_ARATH 1 478 + 478 Gaps:39 100.00 483 62.73 0.0 Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS Arabidopsis thaliana GN AGD5 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WQQ1|AGD15_ARATH 1 124 + 124 none 53.45 232 74.19 7e-64 Probable ADP-ribosylation factor GTPase-activating protein AGD15 OS Arabidopsis thaliana GN AGD15 PE 2 SV 1
blastp_uniprot_sprot sp|Q5F413|SMAP2_CHICK 14 149 + 136 Gaps:8 31.78 428 48.53 1e-37 Stromal membrane-associated protein 2 OS Gallus gallus GN SMAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8WU79|SMAP2_HUMAN 14 149 + 136 Gaps:8 31.70 429 47.06 4e-36 Stromal membrane-associated protein 2 OS Homo sapiens GN SMAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7TN29|SMAP2_MOUSE 14 149 + 136 Gaps:8 31.78 428 47.06 6e-36 Stromal membrane-associated protein 2 OS Mus musculus GN Smap2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5EA00|SMAP2_BOVIN 14 149 + 136 Gaps:8 31.70 429 46.32 2e-35 Stromal membrane-associated protein 2 OS Bos taurus GN SMAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q91VZ6|SMAP1_MOUSE 9 114 + 106 Gaps:4 25.00 440 53.64 6e-35 Stromal membrane-associated protein 1 OS Mus musculus GN Smap1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8IYB5|SMAP1_HUMAN 9 114 + 106 Gaps:4 23.55 467 52.73 5e-34 Stromal membrane-associated protein 1 OS Homo sapiens GN SMAP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UT34|YIQ9_SCHPO 9 123 + 115 Gaps:6 35.94 320 52.17 5e-33 Uncharacterized protein C824.09c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC824.09c PE 4 SV 1
blastp_uniprot_sprot sp|P40529|AGE2_YEAST 16 123 + 108 Gaps:8 38.93 298 52.59 1e-31 ADP-ribosylation factor GTPase-activating protein effector protein 2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN AGE2 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 16 130 115 SM00105 none Putative GTP-ase activating proteins for the small GTPase, ARF IPR001164
SUPERFAMILY 15 124 110 SSF57863 none none none
PANTHER 9 159 151 PTHR23180 none none none
PANTHER 200 237 38 PTHR23180 none none none
PANTHER 456 476 21 PTHR23180 none none none
PANTHER 200 237 38 PTHR23180:SF204 none none none
PANTHER 9 159 151 PTHR23180:SF204 none none none
PANTHER 456 476 21 PTHR23180:SF204 none none none
PRINTS 47 64 18 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 68 89 22 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 28 47 20 PR00405 none HIV Rev interacting protein signature IPR001164
ProSiteProfiles 16 130 115 PS50115 none ARF GTPase-activating proteins domain profile. IPR001164
Pfam 17 124 108 PF01412 none Putative GTPase activating protein for Arf IPR001164

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting