Protein : Qrob_P0204930.2 Q. robur
Protein Identifier  ? Qrob_P0204930.2 Organism . Name  Quercus robur
Score  69.5 Score Type  egn
Protein Description  (M=1) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED (PTHR23076:SF33) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 720  
Kegg Orthology  K03798
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034357 5 719 + 715 Gaps:16 99.57 702 92.85 0.0 FTSH protease 1 isoform 2
blastp_kegg lcl|pmum:103321157 1 719 + 719 Gaps:8 100.00 719 90.54 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa002083mg 1 719 + 719 Gaps:8 100.00 719 90.54 0.0 hypothetical protein
blastp_kegg lcl|cmo:103493800 1 719 + 719 Gaps:4 100.00 715 90.91 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic
blastp_kegg lcl|vvi:100250509 2 719 + 718 Gaps:14 99.72 706 91.90 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic-like
blastp_kegg lcl|fve:101315305 1 719 + 719 Gaps:10 100.00 711 90.15 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic-like
blastp_kegg lcl|csv:101221159 1 719 + 719 Gaps:4 100.00 715 90.49 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic-like
blastp_kegg lcl|pxb:103927102 1 718 + 718 Gaps:12 99.86 721 89.44 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic
blastp_kegg lcl|cic:CICLE_v10000422mg 1 719 + 719 Gaps:12 100.00 723 88.66 0.0 hypothetical protein
blastp_kegg lcl|cit:102607431 1 719 + 719 Gaps:14 100.00 723 88.66 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic-like
blastp_pdb 2cea_F 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_E 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_D 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_C 262 709 + 448 Gaps:6 93.28 476 56.31 1e-173 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|O82150|FTSH_TOBAC 5 719 + 715 Gaps:12 99.02 714 88.68 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic OS Nicotiana tabacum GN FTSH PE 2 SV 2
blastp_uniprot_sprot sp|Q9FH02|FTSH5_ARATH 1 719 + 719 Gaps:17 100.00 704 87.36 0.0 ATP-dependent zinc metalloprotease FTSH 5 chloroplastic OS Arabidopsis thaliana GN FTSH5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9BAE0|FTSH_MEDSA 6 719 + 714 Gaps:14 99.43 706 87.75 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic OS Medicago sativa GN FTSH PE 1 SV 1
blastp_uniprot_sprot sp|Q39444|FTSH_CAPAN 36 697 + 662 Gaps:6 99.40 662 89.36 0.0 ATP-dependent zinc metalloprotease FTSH chloroplastic (Fragment) OS Capsicum annuum GN FTSH PE 2 SV 1
blastp_uniprot_sprot sp|Q39102|FTSH1_ARATH 1 719 + 719 Gaps:9 100.00 716 84.78 0.0 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Arabidopsis thaliana GN FTSH1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5Z974|FTSH1_ORYSJ 88 719 + 632 Gaps:5 92.27 686 89.57 0.0 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Oryza sativa subsp. japonica GN FTSH1 PE 2 SV 1
blastp_uniprot_sprot sp|P72991|FTSH3_SYNY3 141 716 + 576 Gaps:6 92.86 616 66.96 0.0 ATP-dependent zinc metalloprotease FtsH 3 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH3 PE 1 SV 1
blastp_uniprot_sprot sp|Q2JNP0|FTSH_SYNJB 134 709 + 576 Gaps:14 90.28 638 61.28 0.0 ATP-dependent zinc metalloprotease FtsH OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q55700|FTSH2_SYNY3 141 708 + 568 Gaps:14 90.27 627 56.89 0.0 ATP-dependent zinc metalloprotease FtsH 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH2 PE 1 SV 1
blastp_uniprot_sprot sp|O78516|FTSH_GUITH 137 711 + 575 Gaps:15 90.97 631 56.62 0.0 ATP-dependent zinc metalloprotease FtsH OS Guillardia theta GN ftsH PE 3 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 209 708 500 TIGR01241 none FtsH_fam: ATP-dependent metallopeptidase HflB IPR005936
Pfam 495 708 214 PF01434 none Peptidase family M41 IPR000642
Phobius 207 228 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 404 422 19 PS00674 none AAA-protein family signature. IPR003960
SUPERFAMILY 261 505 245 SSF52540 none none IPR027417
PANTHER 133 711 579 PTHR23076:SF33 none none none
Phobius 229 719 491 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 133 711 579 PTHR23076 none none none
Gene3D 261 432 172 G3DSA:3.40.50.300 none none IPR027417
Phobius 1 206 206 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 435 508 74 G3DSA:1.10.8.60 none none none
SUPERFAMILY 515 709 195 SSF140990 none none none
SMART 297 436 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Hamap 18 719 702 MF_01458 none ATP-dependent zinc metalloprotease FtsH [ftsH]. IPR005936
Pfam 302 433 132 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959

1 Localization

Analysis Start End Length
TMHMM 206 228 22

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting