Protein : Qrob_P0204330.2 Q. robur
Protein Identifier  ? Qrob_P0204330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 4.1.1.17 - Ornithine decarboxylase. Code Enzyme  EC:4.1.1.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 415  
Kegg Orthology  K01581
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006596 polyamine biosynthetic process The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034310 1 414 + 414 Gaps:3 100.00 411 77.37 0.0 Pyridoxal-dependent decarboxylase family protein putative
blastp_kegg lcl|pop:POPTR_0005s26760g 1 414 + 414 Gaps:2 100.00 416 74.76 0.0 POPTRDRAFT_1079795 hypothetical protein
blastp_kegg lcl|vvi:100232922 1 412 + 412 Gaps:3 99.51 411 74.82 0.0 ODC ornithine decarboxylase
blastp_kegg lcl|atr:s00001p00164800 4 413 + 410 Gaps:6 97.62 420 68.05 0.0 AMTR_s00001p00164800 hypothetical protein
blastp_kegg lcl|pda:103701059 8 412 + 405 Gaps:3 97.37 419 69.61 0.0 ornithine decarboxylase-like
blastp_kegg lcl|tcc:TCM_034309 1 414 + 414 Gaps:1 92.81 445 69.01 0.0 Lysine/ornithine decarboxylase
blastp_kegg lcl|pop:POPTR_0002s01720g 34 412 + 379 none 99.48 381 71.50 0.0 POPTRDRAFT_753964 hypothetical protein
blastp_kegg lcl|sot:102584472 20 411 + 392 Gaps:1 91.18 431 67.94 0.0 ornithine decarboxylase-like
blastp_kegg lcl|cmo:103488379 3 413 + 411 Gaps:2 95.78 427 66.26 0.0 ornithine decarboxylase-like
blastp_kegg lcl|sly:544209 20 414 + 395 Gaps:1 91.88 431 66.67 0.0 ODC LEODC ornithine decarboxylase (EC:4.1.1.17)
blastp_pdb 7odc_A 26 404 + 379 Gaps:31 91.04 424 46.89 2e-111 mol:protein length:424 PROTEIN (ORNITHINE DECARBOXYLASE)
blastp_pdb 1d7k_B 26 404 + 379 Gaps:31 91.69 421 46.63 1e-110 mol:protein length:421 HUMAN ORNITHINE DECARBOXYLASE
blastp_pdb 1d7k_A 26 404 + 379 Gaps:31 91.69 421 46.63 1e-110 mol:protein length:421 HUMAN ORNITHINE DECARBOXYLASE
blastp_pdb 2on3_B 26 404 + 379 Gaps:31 83.73 461 46.89 2e-109 mol:protein length:461 Ornithine decarboxylase
blastp_pdb 2on3_A 26 404 + 379 Gaps:31 83.73 461 46.89 2e-109 mol:protein length:461 Ornithine decarboxylase
blastp_pdb 2oo0_B 26 404 + 379 Gaps:31 81.95 471 46.37 2e-109 mol:protein length:471 Ornithine decarboxylase
blastp_pdb 2oo0_A 26 404 + 379 Gaps:31 81.95 471 46.37 2e-109 mol:protein length:471 Ornithine decarboxylase
blastp_pdb 1njj_D 46 404 + 359 Gaps:29 86.59 425 45.11 2e-108 mol:protein length:425 ornithine decarboxylase
blastp_pdb 1njj_C 46 404 + 359 Gaps:29 86.59 425 45.11 2e-108 mol:protein length:425 ornithine decarboxylase
blastp_pdb 1njj_B 46 404 + 359 Gaps:29 86.59 425 45.11 2e-108 mol:protein length:425 ornithine decarboxylase
blastp_uniprot_sprot sp|P50134|DCOR_DATST 20 411 + 392 Gaps:1 91.18 431 67.43 0.0 Ornithine decarboxylase OS Datura stramonium PE 2 SV 1
blastp_uniprot_sprot sp|O22616|DCOR_SOLLC 20 414 + 395 Gaps:1 91.88 431 66.67 0.0 Ornithine decarboxylase OS Solanum lycopersicum GN ODC PE 2 SV 2
blastp_uniprot_sprot sp|Q8S3N2|DCOR_CAPAN 20 411 + 392 Gaps:1 90.34 435 65.65 0.0 Ornithine decarboxylase OS Capsicum annuum GN ODC PE 2 SV 1
blastp_uniprot_sprot sp|P09057|DCOR_RAT 26 411 + 386 Gaps:31 85.25 461 47.33 1e-111 Ornithine decarboxylase OS Rattus norvegicus GN Odc1 PE 1 SV 1
blastp_uniprot_sprot sp|P27119|DCOR_MUSPA 26 404 + 379 Gaps:31 83.73 461 47.67 5e-111 Ornithine decarboxylase OS Mus pahari GN Odc1 PE 2 SV 1
blastp_uniprot_sprot sp|P00860|DCOR_MOUSE 26 404 + 379 Gaps:31 83.73 461 47.41 1e-110 Ornithine decarboxylase OS Mus musculus GN Odc1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UQW9|DCOR_SCHPO 14 405 + 392 Gaps:8 90.28 432 42.56 2e-109 Ornithine decarboxylase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN spe1 PE 2 SV 1
blastp_uniprot_sprot sp|P27117|DCOR_BOVIN 26 404 + 379 Gaps:35 83.73 461 46.89 3e-109 Ornithine decarboxylase OS Bos taurus GN ODC1 PE 2 SV 1
blastp_uniprot_sprot sp|P11926|DCOR_HUMAN 26 404 + 379 Gaps:31 83.73 461 46.89 7e-109 Ornithine decarboxylase OS Homo sapiens GN ODC1 PE 1 SV 2
blastp_uniprot_sprot sp|P27118|DCOR_CHICK 26 404 + 379 Gaps:31 85.78 450 45.85 1e-108 Ornithine decarboxylase (Fragment) OS Gallus gallus GN ODC1 PE 2 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 46 70 25 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 146 168 23 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 312 325 14 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 116 140 25 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 353 363 11 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 373 386 14 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
PRINTS 72 99 28 PR01182 "Reactome:REACT_13" Ornithine decarboxylase signature IPR002433
Gene3D 58 272 215 G3DSA:3.20.20.10 none none IPR029066
Gene3D 273 405 133 G3DSA:2.40.37.10 "Reactome:REACT_13" none IPR009006
PANTHER 37 404 368 PTHR11482 none none none
SUPERFAMILY 46 289 244 SSF51419 none none IPR029066
SUPERFAMILY 268 402 135 SSF50621 "Reactome:REACT_13" none IPR009006
PRINTS 197 210 14 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 386 399 14 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 277 296 20 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 74 92 19 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 94 106 13 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
Pfam 291 404 114 PF00278 "Reactome:REACT_13" Pyridoxal-dependent decarboxylase, C-terminal sheet domain IPR022643
ProSitePatterns 74 92 19 PS00878 "Reactome:REACT_13" Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. IPR022653
Pfam 55 287 233 PF02784 "Reactome:REACT_13" Pyridoxal-dependent decarboxylase, pyridoxal binding domain IPR022644

0 Localization

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 19   Mitochondrion 4 0.055 0.598 NON-PLANT 19