Protein : Qrob_P0201890.2 Q. robur
Protein Identifier  ? Qrob_P0201890.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) 4.1.1.37 - Uroporphyrinogen decarboxylase. Code Enzyme  EC:4.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 217  
Kegg Orthology  K01599
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0004853 uroporphyrinogen decarboxylase activity Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2.
GO:0006779 porphyrin-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100252130 28 211 + 184 Gaps:40 54.77 409 71.43 6e-103 uroporphyrinogen decarboxylase 1 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0881730 28 211 + 184 Gaps:40 52.21 429 70.54 3e-102 uroporphyrinogen decarboxylase putative (EC:4.1.1.37)
blastp_kegg lcl|fve:101298098 28 211 + 184 Gaps:40 54.77 409 70.09 4e-102 uroporphyrinogen decarboxylase 1 chloroplastic-like
blastp_kegg lcl|pmum:103326109 28 211 + 184 Gaps:40 53.98 415 68.75 6e-101 uroporphyrinogen decarboxylase 1 chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa006289mg 28 211 + 184 Gaps:40 53.46 419 69.20 1e-100 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s40130g 28 211 + 184 Gaps:40 55.04 407 69.64 1e-100 hypothetical protein
blastp_kegg lcl|mdm:103444879 8 211 + 204 Gaps:40 59.22 412 64.75 2e-100 uroporphyrinogen decarboxylase 1 chloroplastic
blastp_kegg lcl|pxb:103926881 28 211 + 184 Gaps:40 54.37 412 68.75 4e-100 uroporphyrinogen decarboxylase 1 chloroplastic
blastp_kegg lcl|cmo:103492953 27 211 + 185 Gaps:41 54.46 415 68.58 4e-100 uroporphyrinogen decarboxylase 1 chloroplastic
blastp_kegg lcl|gmx:100807032 28 211 + 184 Gaps:40 54.63 410 68.30 5e-100 uroporphyrinogen decarboxylase 1 chloroplastic-like
blastp_pdb 1j93_A 29 211 + 183 Gaps:41 63.46 353 42.41 2e-57 mol:protein length:353 UROPORPHYRINOGEN DECARBOXYLASE
blastp_pdb 2eja_B 28 208 + 181 Gaps:35 63.91 338 30.56 6e-32 mol:protein length:338 Uroporphyrinogen decarboxylase
blastp_pdb 2eja_A 28 208 + 181 Gaps:35 63.91 338 30.56 6e-32 mol:protein length:338 Uroporphyrinogen decarboxylase
blastp_pdb 3cyv_A 39 211 + 173 Gaps:41 60.45 354 28.97 6e-28 mol:protein length:354 Uroporphyrinogen decarboxylase
blastp_pdb 4exq_A 38 211 + 174 Gaps:46 59.78 368 28.18 7e-26 mol:protein length:368 Uroporphyrinogen decarboxylase
blastp_pdb 2inf_D 31 211 + 181 Gaps:41 61.28 359 29.09 8e-26 mol:protein length:359 Uroporphyrinogen decarboxylase
blastp_pdb 2inf_C 31 211 + 181 Gaps:41 61.28 359 29.09 8e-26 mol:protein length:359 Uroporphyrinogen decarboxylase
blastp_pdb 2inf_B 31 211 + 181 Gaps:41 61.28 359 29.09 8e-26 mol:protein length:359 Uroporphyrinogen decarboxylase
blastp_pdb 2inf_A 31 211 + 181 Gaps:41 61.28 359 29.09 8e-26 mol:protein length:359 Uroporphyrinogen decarboxylase
blastp_pdb 3gw0_A 31 211 + 181 Gaps:43 60.49 367 29.73 4e-22 mol:protein length:367 Uroporphyrinogen decarboxylase
blastp_uniprot_sprot sp|Q93ZB6|DCUP1_ARATH 28 211 + 184 Gaps:40 53.59 418 65.18 9e-96 Uroporphyrinogen decarboxylase 1 chloroplastic OS Arabidopsis thaliana GN HEME1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9AXB0|DCUP1_ORYSJ 28 211 + 184 Gaps:41 55.97 402 58.22 5e-83 Uroporphyrinogen decarboxylase 1 chloroplastic OS Oryza sativa subsp. japonica GN Os01g0622300 PE 2 SV 1
blastp_uniprot_sprot sp|B7KKW4|DCUP_CYAP7 29 211 + 183 Gaps:41 63.46 353 45.09 3e-64 Uroporphyrinogen decarboxylase OS Cyanothece sp. (strain PCC 7424) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|B1WVY1|DCUP_CYAA5 29 211 + 183 Gaps:41 63.28 354 43.75 2e-63 Uroporphyrinogen decarboxylase OS Cyanothece sp. (strain ATCC 51142) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|B1XIF6|DCUP_SYNP2 29 211 + 183 Gaps:41 64.00 350 44.64 7e-63 Uroporphyrinogen decarboxylase OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|P54224|DCUP_SYNY3 29 211 + 183 Gaps:41 64.00 350 43.75 8e-63 Uroporphyrinogen decarboxylase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|Q46LW7|DCUP_PROMT 29 211 + 183 Gaps:41 63.64 352 44.20 2e-62 Uroporphyrinogen decarboxylase OS Prochlorococcus marinus (strain NATL2A) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|Q3AYE3|DCUP_SYNS9 29 211 + 183 Gaps:41 63.64 352 44.64 2e-62 Uroporphyrinogen decarboxylase OS Synechococcus sp. (strain CC9902) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|Q7U645|DCUP_SYNPX 29 211 + 183 Gaps:41 63.64 352 44.64 3e-62 Uroporphyrinogen decarboxylase OS Synechococcus sp. (strain WH8102) GN hemE PE 3 SV 1
blastp_uniprot_sprot sp|Q7V8B4|DCUP_PROMM 29 211 + 183 Gaps:41 63.64 352 44.64 6e-62 Uroporphyrinogen decarboxylase OS Prochlorococcus marinus (strain MIT 9313) GN hemE PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 116 211 96 G3DSA:3.20.20.210 none none none
SUPERFAMILY 30 211 182 SSF51726 none none none
Gene3D 30 115 86 G3DSA:3.20.20.210 none none none
PANTHER 28 211 184 PTHR21091 none none none
Pfam 28 115 88 PF01208 "KEGG:00860+4.1.1.37","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Uroporphyrinogen decarboxylase (URO-D) IPR000257
PANTHER 28 211 184 PTHR21091:SF105 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting