Protein : Qrob_P0198030.2 Q. robur
Protein Identifier  ? Qrob_P0198030.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR22298:SF23 - GLYCOSYL HYDROLASE FAMILY 9 PROTEIN (PTHR22298:SF23) Code Enzyme  EC:3.2.1.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 613  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0030246 carbohydrate binding Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101311005 23 612 + 590 Gaps:10 96.00 625 77.83 0.0 endoglucanase 5-like
blastp_kegg lcl|pmum:103321072 19 612 + 594 Gaps:18 96.51 630 76.97 0.0 endoglucanase 5
blastp_kegg lcl|rcu:RCOM_0599690 1 612 + 612 Gaps:10 100.00 620 75.32 0.0 endo-1 4-beta-glucanase putative (EC:3.2.1.4)
blastp_kegg lcl|pper:PRUPE_ppa022524mg 19 612 + 594 Gaps:25 96.28 591 81.55 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_007739 1 612 + 612 Gaps:14 100.00 626 75.56 0.0 Glycosyl hydrolase 9C1 isoform 1
blastp_kegg lcl|pop:POPTR_0007s07790g 19 612 + 594 Gaps:7 97.05 611 77.57 0.0 POPTRDRAFT_871818 endo-1 family protein
blastp_kegg lcl|mdm:103403402 23 612 + 590 Gaps:14 96.03 629 75.17 0.0 endoglucanase 5
blastp_kegg lcl|pxb:103943206 23 612 + 590 Gaps:13 96.02 628 75.29 0.0 endoglucanase 5
blastp_kegg lcl|cam:101500876 1 612 + 612 Gaps:21 100.00 627 74.32 0.0 endoglucanase 5-like
blastp_kegg lcl|gmx:100802420 1 612 + 612 Gaps:21 94.73 664 72.66 0.0 endoglucanase 5-like
blastp_pdb 1ksd_A 28 492 + 465 Gaps:43 98.38 433 48.12 7e-111 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 1ksc_A 28 492 + 465 Gaps:43 98.38 433 48.12 7e-111 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 1ks8_A 28 492 + 465 Gaps:43 98.38 433 48.12 7e-111 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 4tf4_B 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 4tf4_A 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 3tf4_B 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 3tf4_A 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1tf4_B 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1tf4_A 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1js4_B 28 551 + 524 Gaps:59 80.50 605 43.53 4e-102 mol:protein length:605 ENDO/EXOCELLULASE E4
blastp_uniprot_sprot sp|Q9M995|GUN5_ARATH 28 612 + 585 Gaps:32 95.53 627 70.62 0.0 Endoglucanase 5 OS Arabidopsis thaliana GN At1g48930 PE 2 SV 1
blastp_uniprot_sprot sp|A2XYW8|GUN13_ORYSI 28 611 + 584 Gaps:8 93.76 625 61.26 0.0 Endoglucanase 13 OS Oryza sativa subsp. indica GN GLU6 PE 3 SV 2
blastp_uniprot_sprot sp|Q0J930|GUN13_ORYSJ 28 611 + 584 Gaps:8 93.76 625 61.09 0.0 Endoglucanase 13 OS Oryza sativa subsp. japonica GN GLU6 PE 2 SV 1
blastp_uniprot_sprot sp|Q42059|GUN6_ARATH 29 611 + 583 Gaps:16 95.65 620 52.45 0.0 Endoglucanase 6 OS Arabidopsis thaliana GN At1g64390 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L7I0|GUN19_ARATH 29 611 + 583 Gaps:21 95.53 626 52.84 0.0 Endoglucanase 19 OS Arabidopsis thaliana GN At4g11050 PE 2 SV 1
blastp_uniprot_sprot sp|Q5NAT0|GUN2_ORYSJ 9 611 + 603 Gaps:19 96.88 640 49.68 0.0 Endoglucanase 2 OS Oryza sativa subsp. japonica GN GLU5 PE 1 SV 1
blastp_uniprot_sprot sp|O48766|GUN11_ARATH 6 491 + 486 Gaps:2 92.95 525 57.79 0.0 Endoglucanase 11 OS Arabidopsis thaliana GN At2g32990 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L4I2|GUN15_ORYSJ 10 602 + 593 Gaps:19 96.34 629 49.17 0.0 Endoglucanase 15 OS Oryza sativa subsp. japonica GN Os05g0212300 PE 2 SV 1
blastp_uniprot_sprot sp|Q6H3Z9|GUN22_ORYSJ 28 495 + 468 Gaps:9 85.79 556 57.44 0.0 Endoglucanase 22 OS Oryza sativa subsp. japonica GN GLU11 PE 2 SV 2
blastp_uniprot_sprot sp|Q5NAT8|GUN1_ORYSJ 9 611 + 603 Gaps:30 97.66 640 48.96 0.0 Endoglucanase 1 OS Oryza sativa subsp. japonica GN GLU7 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 16 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 6 515 510 PTHR22298 none none none
Phobius 17 20 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSitePatterns 401 417 17 PS00592 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolases family 9 active sites signature 1. IPR018221
ProSitePatterns 465 483 19 PS00698 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolases family 9 active sites signature 2. IPR018221
SUPERFAMILY 27 495 469 SSF48208 none none IPR008928
Pfam 29 490 462 PF00759 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolase family 9 IPR001701
Gene3D 27 494 468 G3DSA:1.50.10.10 none none IPR012341
PANTHER 6 515 510 PTHR22298:SF23 none none none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 21 612 592 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 520 600 81 SM01063 none Carbohydrate binding domain CBM49 IPR019028
Pfam 521 599 79 PF09478 none Carbohydrate binding domain CBM49 IPR019028

2 Localization

Analysis Start End Length
TMHMM 7 29 22
SignalP_EUK 1 20 19

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.965 0.025 NON-PLANT 23