Protein : Qrob_P0195960.2 Q. robur
Protein Identifier  ? Qrob_P0195960.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10343//PTHR10343:SF52 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 611  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006470 protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
GO:0008138 protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
GO:0005983 starch catabolic process The chemical reactions and pathways resulting in the breakdown of starch, the most important reserve polysaccharide in plants.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100252584 7 562 + 556 Gaps:43 92.45 583 77.37 0.0 uncharacterized LOC100252584
blastp_kegg lcl|pper:PRUPE_ppa003283mg 4 585 + 582 Gaps:44 97.10 587 74.74 0.0 hypothetical protein
blastp_kegg lcl|pmum:103330172 65 563 + 499 Gaps:16 95.63 526 79.92 0.0 phosphoglucan phosphatase LSF1 chloroplastic
blastp_kegg lcl|csv:101214241 7 569 + 563 Gaps:41 94.06 589 72.74 0.0 phosphoglucan phosphatase LSF1 chloroplastic-like
blastp_kegg lcl|cmo:103487090 23 569 + 547 Gaps:35 90.32 589 74.81 0.0 phosphoglucan phosphatase LSF1 chloroplastic
blastp_kegg lcl|pxb:103926927 48 585 + 538 Gaps:19 91.69 590 73.38 0.0 phosphoglucan phosphatase LSF1 chloroplastic
blastp_kegg lcl|tcc:TCM_016888 67 562 + 496 Gaps:17 87.39 571 77.76 0.0 hypothetical protein
blastp_kegg lcl|cit:102615969 70 569 + 500 Gaps:16 86.30 584 75.20 0.0 phosphoglucan phosphatase LSF1 chloroplastic-like
blastp_kegg lcl|mdm:103411158 56 585 + 530 Gaps:15 91.02 590 73.00 0.0 phosphoglucan phosphatase LSF1 chloroplastic-like
blastp_kegg lcl|fve:101294692 23 569 + 547 Gaps:33 89.86 592 75.19 0.0 phosphoglucan phosphatase LSF1 chloroplastic-like
blastp_pdb 3nme_B 286 553 + 268 Gaps:21 88.10 294 32.82 2e-30 mol:protein length:294 SEX4 glucan phosphatase
blastp_pdb 3nme_A 286 553 + 268 Gaps:21 88.10 294 32.82 2e-30 mol:protein length:294 SEX4 glucan phosphatase
blastp_uniprot_sprot sp|F4J117|LSF1_ARATH 76 569 + 494 Gaps:17 84.09 591 72.64 0.0 Phosphoglucan phosphatase LSF1 chloroplastic OS Arabidopsis thaliana GN LSF1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FEB5|DSP4_ARATH 275 553 + 279 Gaps:22 71.50 379 32.84 3e-32 Phosphoglucan phosphatase DSP4 chloroplastic OS Arabidopsis thaliana GN DSP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRK5|LSF2_ARATH 250 447 + 198 Gaps:3 71.28 282 32.34 2e-26 Phosphoglucan phosphatase LSF2 chloroplastic OS Arabidopsis thaliana GN LSF2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9WUA5|EPM2A_MOUSE 227 440 + 214 Gaps:40 66.67 330 32.27 4e-11 Laforin OS Mus musculus GN Epm2a PE 1 SV 2
blastp_uniprot_sprot sp|Q91XQ2|EPM2A_RAT 227 440 + 214 Gaps:30 67.28 327 29.09 5e-11 Laforin (Fragment) OS Rattus norvegicus GN Epm2a PE 2 SV 1
blastp_uniprot_sprot sp|O95278|EPM2A_HUMAN 227 440 + 214 Gaps:44 66.47 331 31.82 2e-10 Laforin OS Homo sapiens GN EPM2A PE 1 SV 2
blastp_uniprot_sprot sp|Q1M199|EPM2A_CANFA 227 440 + 214 Gaps:30 66.47 331 28.18 9e-10 Laforin OS Canis familiaris GN EPM2A PE 3 SV 1
rpsblast_cdd gnl|CDD|199889 464 547 + 84 Gaps:5 98.75 80 41.77 7e-21 cd02859 E_set_AMPKbeta_like_N N-terminal Early set domain a glycogen binding domain associated with the catalytic domain of AMP-activated protein kinase beta subunit. E or "early" set domains are associated with the catalytic domain of AMP-activated protein kinase beta subunit glycogen binding domain at the N-terminal end. AMPK is a metabolic stress sensing protein that senses AMP/ATP and has recently been found to act as a glycogen sensor as well. The protein functions as an alpha-beta-gamma heterotrimer. This N-terminal domain is the glycogen binding domain of the beta subunit. This domain is also a member of the CBM48 (Carbohydrate Binding Module 48) family whose members include pullulanase maltooligosyl trehalose synthase starch branching enzyme glycogen branching enzyme glycogen debranching enzyme and isoamylase.
rpsblast_cdd gnl|CDD|29029 299 427 + 129 Gaps:13 83.45 139 34.48 2e-09 cd00127 DSPc Dual specificity phosphatases (DSP) Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif HCxxGxxR. Characterized as VHR- or Cdc25-like..
rpsblast_cdd gnl|CDD|197568 299 427 + 129 Gaps:15 82.61 138 29.82 1e-08 smart00195 DSPc Dual specificity phosphatase catalytic domain.
rpsblast_cdd gnl|CDD|201441 305 440 + 136 Gaps:21 87.79 131 33.91 1e-07 pfam00782 DSPc Dual specificity phosphatase catalytic domain. Ser/Thr and Tyr protein phosphatases. The enzyme's tertiary fold is highly similar to that of tyrosine-specific phosphatases except for a "recognition" region.
rpsblast_kog gnl|CDD|36829 434 563 + 130 Gaps:8 43.60 289 29.37 4e-14 KOG1616 KOG1616 KOG1616 Protein involved in Snf1 protein kinase complex assembly [Carbohydrate transport and metabolism].
rpsblast_kog gnl|CDD|36928 258 427 + 170 Gaps:12 55.44 285 24.05 2e-12 KOG1716 KOG1716 KOG1716 Dual specificity phosphatase [Defense mechanisms].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 297 453 157 SM00195 none Dual specificity phosphatase, catalytic domain IPR020422
ProSiteProfiles 94 175 82 PS50106 none PDZ domain profile. IPR001478
Pfam 305 434 130 PF00782 none Dual specificity phosphatase, catalytic domain IPR000340
PANTHER 73 276 204 PTHR10343:SF52 none none IPR030066
PANTHER 454 562 109 PTHR10343:SF52 none none IPR030066
SUPERFAMILY 461 548 88 SSF81296 none none IPR014756
Gene3D 290 430 141 G3DSA:3.90.190.10 none none IPR029021
SUPERFAMILY 79 180 102 SSF50156 none none IPR001478
ProSiteProfiles 297 427 131 PS50054 none Dual specificity protein phosphatase family profile. IPR020422
PANTHER 73 276 204 PTHR10343 none none none
PANTHER 454 562 109 PTHR10343 none none none
SUPERFAMILY 289 428 140 SSF52799 none none IPR029021

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Mitochondrion 2 0.073 0.803 NON-PLANT 28