Protein : Qrob_P0195010.2 Q. robur
Protein Identifier  ? Qrob_P0195010.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11785:SF261 - PROTEIN C50D2.2 (PTHR11785:SF261) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 545  
Kegg Orthology  K03294
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253107 42 539 + 498 Gaps:53 95.99 574 76.04 0.0 uncharacterized LOC100253107
blastp_kegg lcl|mdm:103430319 41 539 + 499 Gaps:47 93.33 585 73.08 0.0 cationic amino acid transporter 9 chloroplastic-like
blastp_kegg lcl|fve:101292343 27 539 + 513 Gaps:50 98.41 566 72.17 0.0 cationic amino acid transporter 9 chloroplastic-like
blastp_kegg lcl|gmx:100804988 48 539 + 492 Gaps:48 96.06 558 73.88 0.0 cationic amino acid transporter 9 chloroplastic-like
blastp_kegg lcl|gmx:100776671 43 544 + 502 Gaps:51 96.96 560 73.11 0.0 cationic amino acid transporter 9 chloroplastic-like
blastp_kegg lcl|cit:102630975 39 535 + 497 Gaps:52 93.94 578 73.48 0.0 cationic amino acid transporter 9 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_008G045400g 48 544 + 497 Gaps:68 96.03 580 68.76 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003498mg 27 539 + 513 Gaps:47 98.42 569 71.96 0.0 hypothetical protein
blastp_kegg lcl|pmum:103331598 27 535 + 509 Gaps:47 96.53 576 72.12 0.0 cationic amino acid transporter 9 chloroplastic
blastp_kegg lcl|rcu:RCOM_1608660 29 542 + 514 Gaps:50 99.30 568 70.04 0.0 cationic amino acid transporter putative
blastp_pdb 3gi8_C 71 379 + 309 Gaps:26 69.59 444 27.83 3e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3gia_A 71 379 + 309 Gaps:26 69.59 444 27.83 3e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3gi9_C 71 379 + 309 Gaps:26 69.59 444 27.83 3e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3ncy_D 67 401 + 335 Gaps:21 75.06 445 23.35 1e-07 mol:protein length:445 AdiC
blastp_pdb 3ncy_C 67 401 + 335 Gaps:21 75.06 445 23.35 1e-07 mol:protein length:445 AdiC
blastp_pdb 3ncy_B 67 401 + 335 Gaps:21 75.06 445 23.35 1e-07 mol:protein length:445 AdiC
blastp_pdb 3ncy_A 67 401 + 335 Gaps:21 75.06 445 23.35 1e-07 mol:protein length:445 AdiC
blastp_pdb 3l1l_A 67 401 + 335 Gaps:37 75.06 445 23.35 3e-07 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3ob6_B 67 401 + 335 Gaps:19 75.06 445 23.05 2e-06 mol:protein length:445 AdiC arginine:agmatine antiporter
blastp_pdb 3ob6_A 67 401 + 335 Gaps:19 75.06 445 23.05 2e-06 mol:protein length:445 AdiC arginine:agmatine antiporter
blastp_uniprot_sprot sp|Q9C5D6|CAAT9_ARATH 31 537 + 507 Gaps:55 97.72 569 66.91 0.0 Cationic amino acid transporter 9 chloroplastic OS Arabidopsis thaliana GN CAT9 PE 2 SV 1
blastp_uniprot_sprot sp|Q797A7|YFNA_BACSU 46 433 + 388 Gaps:22 85.90 461 42.93 5e-86 Uncharacterized amino acid permease YfnA OS Bacillus subtilis (strain 168) GN yfnA PE 3 SV 1
blastp_uniprot_sprot sp|Q8W4K3|CAAT4_ARATH 69 446 + 378 Gaps:32 65.67 600 39.34 4e-81 Cationic amino acid transporter 4 vacuolar OS Arabidopsis thaliana GN CAT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ASS7|CAAT2_ARATH 48 449 + 402 Gaps:29 65.35 635 36.87 3e-71 Cationic amino acid transporter 2 vacuolar OS Arabidopsis thaliana GN CAT2 PE 1 SV 1
blastp_uniprot_sprot sp|O07576|YHDG_BACSU 69 433 + 365 Gaps:19 81.29 465 38.89 3e-66 Uncharacterized amino acid permease YhdG OS Bacillus subtilis (strain 168) GN yhdG PE 2 SV 1
blastp_uniprot_sprot sp|Q8GYB4|CAAT3_ARATH 69 449 + 381 Gaps:32 65.19 609 37.28 8e-66 Cationic amino acid transporter 3 mitochondrial OS Arabidopsis thaliana GN CAT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DCE8|CTR2_XENLA 69 438 + 370 Gaps:53 65.76 622 36.92 2e-65 Low affinity cationic amino acid transporter 2 OS Xenopus laevis GN slc7a2 PE 2 SV 1
blastp_uniprot_sprot sp|B3TP03|CTR2_CHICK 67 435 + 369 Gaps:83 62.39 654 35.54 2e-61 Low affinity cationic amino acid transporter 2 OS Gallus gallus GN SLC7A2 PE 2 SV 1
blastp_uniprot_sprot sp|B5D5N9|CTR2_RAT 69 435 + 367 Gaps:58 61.64 657 35.31 2e-61 Low affinity cationic amino acid transporter 2 OS Rattus norvegicus GN Slc7a2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8TBB6|S7A14_HUMAN 41 438 + 398 Gaps:29 54.09 771 35.01 5e-61 Probable cationic amino acid transporter OS Homo sapiens GN SLC7A14 PE 2 SV 3

32 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 469 473 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 23 438 416 PTHR11785 none none IPR002293
PANTHER 467 529 63 PTHR11785 none none IPR002293
Phobius 411 415 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 23 438 416 PTHR11785:SF261 none none none
PANTHER 467 529 63 PTHR11785:SF261 none none none
Pfam 73 444 372 PF13520 none Amino acid permease IPR002293
Phobius 159 163 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 336 359 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 500 518 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 95 105 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 447 468 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 139 158 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 106 127 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 73 94 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 72 72 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 494 499 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 128 138 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 392 410 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 228 256 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 164 184 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 279 289 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 519 544 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 416 435 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 204 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 205 227 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 436 446 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 257 278 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 317 335 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 474 493 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

13 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25
TMHMM 500 519 19
TMHMM 131 153 22
TMHMM 200 222 22
TMHMM 337 359 22
TMHMM 105 124 19
TMHMM 249 271 22
TMHMM 445 467 22
TMHMM 292 314 22
TMHMM 392 414 22
TMHMM 168 187 19
TMHMM 474 496 22
TMHMM 73 95 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 64   Mitochondrion 4 0.032 0.731 NON-PLANT 64