Protein : Qrob_P0193060.2 Q. robur
Protein Identifier  ? Qrob_P0193060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR12665 - ORMDL PROTEINS Gene Prediction Quality  validated
Protein length 

Sequence

Length: 155  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244495 1 154 + 154 none 98.09 157 91.56 2e-99 uncharacterized LOC100244495
blastp_kegg lcl|sot:102595624 2 154 + 153 none 97.45 157 92.16 4e-99 uncharacterized LOC102595624
blastp_kegg lcl|sly:101268781 2 154 + 153 none 97.45 157 92.16 4e-99 uncharacterized LOC101268781
blastp_kegg lcl|cam:101515064 1 154 + 154 none 98.09 157 88.31 4e-98 ORM1-like protein 3-like
blastp_kegg lcl|eus:EUTSA_v10023737mg 1 154 + 154 none 99.35 155 87.66 2e-97 hypothetical protein
blastp_kegg lcl|cit:102606829 1 154 + 154 none 97.47 158 88.31 3e-97 hypothetical protein
blastp_kegg lcl|csv:101207630 1 154 + 154 none 98.09 157 87.66 7e-97 uncharacterized LOC101207630
blastp_kegg lcl|vvi:100258632 1 154 + 154 none 98.09 157 87.01 2e-96 uncharacterized LOC100258632
blastp_kegg lcl|brp:103838181 1 154 + 154 none 99.35 155 86.36 3e-96 uncharacterized protein C119.09c-like
blastp_kegg lcl|cmo:103483168 1 154 + 154 none 98.09 157 87.01 3e-96 ORM1-like protein 3
blastp_uniprot_sprot sp|O42901|YBA9_SCHPO 12 151 + 140 none 75.27 186 40.00 2e-32 Uncharacterized protein C119.09c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC119.09c PE 2 SV 3
blastp_uniprot_sprot sp|Q921I0|ORML1_MOUSE 9 151 + 143 Gaps:1 94.12 153 41.67 4e-31 ORM1-like protein 1 OS Mus musculus GN Ormdl1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CPZ6|ORML3_MOUSE 9 151 + 143 Gaps:1 94.12 153 40.97 1e-30 ORM1-like protein 3 OS Mus musculus GN Ormdl3 PE 2 SV 1
blastp_uniprot_sprot sp|Q53FV1|ORML2_HUMAN 9 151 + 143 Gaps:1 94.12 153 40.97 2e-30 ORM1-like protein 2 OS Homo sapiens GN ORMDL2 PE 2 SV 2
blastp_uniprot_sprot sp|Q5XH57|ORML1_XENLA 9 151 + 143 Gaps:1 94.12 153 42.36 2e-30 ORM1-like protein 1 OS Xenopus laevis GN ormdl1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6QI25|ORML3_RAT 9 151 + 143 Gaps:1 94.12 153 40.97 2e-30 ORM1-like protein 3 OS Rattus norvegicus GN Ormdl3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8N138|ORML3_HUMAN 9 151 + 143 Gaps:1 94.12 153 40.28 4e-30 ORM1-like protein 3 OS Homo sapiens GN ORMDL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q0VD15|ORML3_BOVIN 9 151 + 143 Gaps:1 94.12 153 40.28 4e-30 ORM1-like protein 3 OS Bos taurus GN ORMDL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R570|ORML3_PONAB 9 151 + 143 Gaps:1 94.12 153 40.28 6e-30 ORM1-like protein 3 OS Pongo abelii GN ORMDL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XJR6|ORML3_DANRE 9 151 + 143 Gaps:1 94.12 153 39.58 2e-29 ORM1-like protein 3 OS Danio rerio GN ormdl3 PE 2 SV 1
rpsblast_cdd gnl|CDD|190849 12 146 + 135 none 100.00 135 46.67 3e-49 pfam04061 ORMDL ORMDL family. Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex has been termed the SPOTS complex (serine palmitoyltransferase Orm1/2 Tsc3 and Sac1).
rpsblast_cdd gnl|CDD|34685 7 150 + 144 Gaps:1 79.44 180 30.77 5e-25 COG5081 COG5081 Predicted membrane protein [Function unknown].
rpsblast_kog gnl|CDD|38529 1 153 + 153 none 100.00 153 53.59 9e-53 KOG3319 KOG3319 KOG3319 Predicted membrane protein [Function unknown].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 43 47 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 123 140 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 21 42 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 48 65 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 12 146 135 PF04061 none ORMDL family IPR007203
PIRSF 1 154 154 PIRSF018147 none none IPR007203
PANTHER 1 151 151 PTHR12665 none none IPR007203
Phobius 118 122 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 101 117 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 141 154 14 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 66 100 35 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

3 Localization

Analysis Start End Length
TMHMM 20 42 22
TMHMM 119 136 17
TMHMM 47 66 19

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 40   Secretory pathway 5 0.572 0.076 NON-PLANT 40