Protein : Qrob_P0189070.2 Q. robur
Protein Identifier  ? Qrob_P0189070.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31407:SF3 - PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC (PTHR31407:SF3) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 111  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0009523 photosystem II A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
GO:0009654 photosystem II oxygen evolving complex A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).
GO:0019898 extrinsic component of membrane The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10002322mg 3 85 + 83 none 34.73 239 81.93 7e-42 hypothetical protein
blastp_kegg lcl|cit:102609035 3 85 + 83 none 34.73 239 81.93 7e-42 psbP domain-containing protein 2 chloroplastic-like
blastp_kegg lcl|pmum:103327040 4 85 + 82 none 34.60 237 82.93 2e-40 psbP domain-containing protein 2 chloroplastic
blastp_kegg lcl|fve:101306271 5 85 + 81 none 34.76 233 81.48 1e-39 psbP domain-containing protein 2 chloroplastic-like isoform 1
blastp_kegg lcl|pop:POPTR_0007s04650g 1 85 + 85 none 33.33 255 74.12 4e-38 POPTRDRAFT_217280 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0080260 6 85 + 80 Gaps:1 33.20 244 80.25 2e-37 hypothetical protein
blastp_kegg lcl|cam:101497097 6 85 + 80 Gaps:1 34.62 234 76.54 3e-36 psbP domain-containing protein 2 chloroplastic-like
blastp_kegg lcl|mtr:MTR_122s0055 8 85 + 78 Gaps:2 33.76 237 75.00 3e-34 PsbP domain-containing protein
blastp_kegg lcl|mtr:MTR_3g096750 8 85 + 78 Gaps:2 33.76 237 75.00 3e-34 PsbP domain-containing protein
blastp_kegg lcl|sot:102599743 7 85 + 79 none 32.64 242 72.15 3e-33 psbP domain-containing protein 2 chloroplastic-like
blastp_pdb 2xb3_A 13 110 + 98 Gaps:12 66.67 165 30.91 1e-07 mol:protein length:165 PSBP PROTEIN
blastp_uniprot_sprot sp|Q8VY52|PPD2_ARATH 12 85 + 74 none 31.90 232 68.92 9e-30 PsbP domain-containing protein 2 chloroplastic OS Arabidopsis thaliana GN PPD2 PE 1 SV 1
rpsblast_cdd gnl|CDD|201975 13 80 + 68 Gaps:2 42.94 163 34.29 3e-09 pfam01789 PsbP PsbP. This family consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria. The 23 KDa PsbP protein is required for PSII to be fully operational in vivo it increases the affinity of the water oxidation site for Cl- and provides the conditions required for high affinity binding of Ca2+.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 11 84 74 PF01789 none PsbP IPR002683
PANTHER 7 103 97 PTHR31407:SF3 none none none
SUPERFAMILY 13 93 81 SSF55724 none none IPR016123
Gene3D 12 88 77 G3DSA:3.40.1000.10 none none IPR016123
PANTHER 7 103 97 PTHR31407 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting