Protein : Qrob_P0181870.2 Q. robur
Protein Identifier  ? Qrob_P0181870.2 Organism . Name  Quercus robur
Score  3.2 Score Type  egn
Protein Description  (M=17) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1246  
Kegg Orthology  K05658
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0042626 ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103323402 1 1245 + 1245 Gaps:27 98.07 1293 74.61 0.0 ABC transporter B family member 11-like
blastp_kegg lcl|pmum:103323399 3 1245 + 1243 Gaps:29 97.98 1290 75.87 0.0 ABC transporter B family member 4-like
blastp_kegg lcl|pper:PRUPE_ppa015389mg 1 1245 + 1245 Gaps:27 98.07 1293 73.97 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000316mg 1 1245 + 1245 Gaps:27 98.07 1293 75.55 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_004938 9 1245 + 1237 Gaps:22 97.29 1292 73.19 0.0 ATP binding cassette subfamily B4 isoform 1
blastp_kegg lcl|pper:PRUPE_ppa000312mg 7 1245 + 1239 Gaps:39 97.69 1296 76.22 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000315mg 1 1245 + 1245 Gaps:27 98.07 1293 75.08 0.0 hypothetical protein
blastp_kegg lcl|fve:101307483 9 1245 + 1237 Gaps:30 97.39 1301 74.11 0.0 ABC transporter B family member 4-like
blastp_kegg lcl|pper:PRUPE_ppa017251mg 7 1245 + 1239 Gaps:10 97.64 1269 77.00 0.0 hypothetical protein
blastp_kegg lcl|fve:101312432 4 1245 + 1242 Gaps:23 97.76 1292 72.13 0.0 ABC transporter B family member 11-like
blastp_pdb 3g61_B 30 1243 + 1214 Gaps:44 96.26 1284 40.37 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_A 30 1243 + 1214 Gaps:44 96.26 1284 40.37 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_B 30 1243 + 1214 Gaps:44 96.26 1284 40.37 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_A 30 1243 + 1214 Gaps:44 96.26 1284 40.37 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_B 30 1243 + 1214 Gaps:44 96.26 1284 40.29 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_A 30 1243 + 1214 Gaps:44 96.26 1284 40.29 0.0 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 2yl4_A 95 1237 + 1143 Gaps:18 89.24 595 49.34 3e-120 mol:protein length:595 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 4aa3_A 95 1237 + 1143 Gaps:18 84.49 619 49.71 3e-118 mol:protein length:619 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 3b60_D 42 1236 + 1195 Gaps:51 96.91 582 46.10 9e-87 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_pdb 3b60_C 42 1236 + 1195 Gaps:51 96.91 582 46.10 9e-87 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_uniprot_sprot sp|Q9FWX7|AB11B_ARATH 23 1245 + 1223 Gaps:25 97.03 1278 70.00 0.0 ABC transporter B family member 11 OS Arabidopsis thaliana GN ABCB11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M1Q9|AB21B_ARATH 20 1245 + 1226 Gaps:15 95.60 1296 68.68 0.0 ABC transporter B family member 21 OS Arabidopsis thaliana GN ABCB21 PE 1 SV 2
blastp_uniprot_sprot sp|O80725|AB4B_ARATH 24 1245 + 1222 Gaps:36 96.58 1286 68.28 0.0 ABC transporter B family member 4 OS Arabidopsis thaliana GN ABCB4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FWX8|AB12B_ARATH 11 1245 + 1235 Gaps:35 98.98 1273 67.06 0.0 ABC transporter B family member 12 OS Arabidopsis thaliana GN ABCB12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SYI3|AB5B_ARATH 16 1245 + 1230 Gaps:12 99.84 1230 65.88 0.0 ABC transporter B family member 5 OS Arabidopsis thaliana GN ABCB5 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SYI2|AB3B_ARATH 19 1245 + 1227 Gaps:15 99.92 1229 66.61 0.0 ABC transporter B family member 3 OS Arabidopsis thaliana GN ABCB3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0M2|AB9B_ARATH 9 1244 + 1236 Gaps:52 99.84 1236 62.88 0.0 ABC transporter B family member 9 OS Arabidopsis thaliana GN ABCB9 PE 3 SV 2
blastp_uniprot_sprot sp|Q9FHF1|AB7B_ARATH 25 1244 + 1220 Gaps:17 98.64 1248 59.63 0.0 ABC transporter B family member 7 OS Arabidopsis thaliana GN ABCB7 PE 3 SV 1
blastp_uniprot_sprot sp|Q8LPK2|AB2B_ARATH 16 1244 + 1229 Gaps:48 97.01 1273 50.20 0.0 ABC transporter B family member 2 OS Arabidopsis thaliana GN ABCB2 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LJX0|AB19B_ARATH 1 1241 + 1241 Gaps:28 99.76 1252 43.39 0.0 ABC transporter B family member 19 OS Arabidopsis thaliana GN ABCB19 PE 1 SV 1

41 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 504 518 15 PS00211 none ABC transporters family signature. IPR017871
Pfam 42 316 275 PF00664 none ABC transporter transmembrane region IPR011527
Pfam 682 955 274 PF00664 none ABC transporter transmembrane region IPR011527
Phobius 112 162 51 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 365 601 237 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Phobius 183 187 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 188 209 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 1001 1238 238 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
PANTHER 426 1240 815 PTHR24221 none none none
Phobius 163 182 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 30 346 317 G3DSA:1.20.1560.10 none none none
Gene3D 670 980 311 G3DSA:1.20.1560.10 none none none
Phobius 930 1245 316 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 819 823 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 355 603 249 SSF52540 none none IPR027417
ProSiteProfiles 683 969 287 PS50929 none ABC transporter integral membrane type-1 fused domain profile. IPR011527
Phobius 722 738 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 392 578 187 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 1028 1222 195 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SUPERFAMILY 29 349 321 SSF90123 none none IPR011527
Phobius 210 678 469 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 797 818 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 111 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 43 330 288 PS50929 none ABC transporter integral membrane type-1 fused domain profile. IPR011527
Phobius 905 929 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 679 702 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 1021 1169 149 PF00005 none ABC transporter IPR003439
Pfam 384 532 149 PF00005 none ABC transporter IPR003439
Phobius 1 38 38 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 365 596 232 G3DSA:3.40.50.300 none none IPR027417

11 Localization

Analysis Start End Length
TMHMM 39 61 22
TMHMM 908 930 22
TMHMM 90 112 22
TMHMM 721 738 17
TMHMM 824 843 19
TMHMM 187 209 22
TMHMM 268 290 22
TMHMM 801 820 19
TMHMM 679 701 22
TMHMM 300 319 19
TMHMM 163 182 19

0 Qtllist

0 Targeting