Protein : Qrob_P0180960.2 Q. robur
Protein Identifier  ? Qrob_P0180960.2 Organism . Name  Quercus robur
Score  18.8 Score Type  egn
Protein Description  (M=15) KOG4768 - Mitochondrial mRNA maturase [RNA processing and modification]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 415  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006397 mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_033550 1 414 + 414 Gaps:8 56.27 750 79.62 0.0 RNA-directed DNA polymerase
blastp_kegg lcl|vvi:100264128 1 414 + 414 Gaps:7 55.61 757 79.10 0.0 putative COX1/OXI3 intron 2 protein-like
blastp_kegg lcl|cit:102607317 1 414 + 414 Gaps:7 52.62 800 78.15 0.0 uncharacterized LOC102607317
blastp_kegg lcl|rcu:RCOM_0160820 1 414 + 414 Gaps:7 56.06 751 76.72 0.0 RNA binding protein putative
blastp_kegg lcl|mdm:103448365 1 414 + 414 Gaps:7 54.96 766 76.25 0.0 uncharacterized LOC103448365
blastp_kegg lcl|fve:101298146 1 414 + 414 Gaps:7 52.36 804 75.30 0.0 uncharacterized protein LOC101298146
blastp_kegg lcl|sot:102587557 1 414 + 414 Gaps:7 55.25 762 68.88 0.0 uncharacterized LOC102587557
blastp_kegg lcl|brp:103847334 1 413 + 413 Gaps:7 55.93 751 72.62 0.0 uncharacterized LOC103847334
blastp_kegg lcl|cmo:103501588 1 414 + 414 Gaps:7 55.10 764 71.73 0.0 putative COX1/OXI3 intron 1 protein
blastp_kegg lcl|gmx:100817946 1 414 + 414 Gaps:7 57.51 732 73.40 0.0 uncharacterized LOC100817946
rpsblast_cdd gnl|CDD|110356 189 306 + 118 Gaps:16 81.69 142 33.62 1e-16 pfam01348 Intron_maturas2 Type II intron maturase. Group II introns use intron-encoded reverse transcriptase maturase and DNA endonuclease activities for site-specific insertion into DNA. Although this type of intron is self splicing in vitro they require a maturase protein for splicing in vivo. It has been shown that a specific region of the aI2 intron is needed for the maturase function. This region was found to be conserved in group II introns and called domain X.
rpsblast_kog gnl|CDD|39965 193 401 + 209 Gaps:22 26.01 796 26.57 2e-10 KOG4768 KOG4768 KOG4768 Mitochondrial mRNA maturase [RNA processing and modification].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 162 183 22 Coil none none none
Pfam 194 305 112 PF01348 none Type II intron maturase IPR024937

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting