Protein : Qrob_P0178280.2 Q. robur
Protein Identifier  ? Qrob_P0178280.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K01761 - methionine-gamma-lyase [EC:4.4.1.11] Code Enzyme  EC:4.4.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 455  
Kegg Orthology  K01761
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1313240 1 447 + 447 Gaps:2 99.55 449 82.33 0.0 cystathionine gamma-synthase putative (EC:2.5.1.48)
blastp_kegg lcl|pop:POPTR_0001s11350g 1 451 + 451 Gaps:5 99.56 454 82.30 0.0 POPTRDRAFT_709036 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme family protein
blastp_kegg lcl|tcc:TCM_015649 1 453 + 453 Gaps:4 99.78 454 83.66 0.0 Methionine gamma-lyase
blastp_kegg lcl|mdm:103437427 1 452 + 452 Gaps:5 99.56 457 80.44 0.0 methionine gamma-lyase-like
blastp_kegg lcl|cic:CICLE_v10020136mg 10 452 + 443 Gaps:1 98.88 447 83.03 0.0 hypothetical protein
blastp_kegg lcl|cit:102609475 10 452 + 443 Gaps:1 98.88 447 83.26 0.0 methionine gamma-lyase-like
blastp_kegg lcl|fve:101304344 1 453 + 453 Gaps:7 99.78 455 79.74 0.0 methionine gamma-lyase-like
blastp_kegg lcl|pper:PRUPE_ppa005470mg 1 453 + 453 Gaps:9 99.78 459 80.35 0.0 hypothetical protein
blastp_kegg lcl|sot:102589744 1 451 + 451 Gaps:4 100.00 451 80.04 0.0 methionine gamma-lyase-like
blastp_kegg lcl|mdm:103452551 1 453 + 453 Gaps:5 99.78 457 79.82 0.0 methionine gamma-lyase-like
blastp_pdb 3mkj_A 97 426 + 330 Gaps:15 81.16 398 39.01 4e-61 mol:protein length:398 Methionine gamma-lyase
blastp_pdb 3jwb_A 97 426 + 330 Gaps:15 81.16 398 39.01 4e-61 mol:protein length:398 Methionine gamma-lyase
blastp_pdb 3jwa_A 97 426 + 330 Gaps:15 81.16 398 39.01 4e-61 mol:protein length:398 Methionine gamma-lyase
blastp_pdb 3jw9_A 97 426 + 330 Gaps:15 81.16 398 39.01 4e-61 mol:protein length:398 Methionine gamma-lyase
blastp_pdb 1y4i_A 97 426 + 330 Gaps:15 81.16 398 39.01 5e-61 mol:protein length:398 methionine gamma-lyase
blastp_pdb 2rfv_A 97 426 + 330 Gaps:15 81.16 398 39.01 8e-61 mol:protein length:398 Methionine gamma-lyase
blastp_pdb 1e5f_B 47 445 + 399 Gaps:21 96.04 404 34.02 2e-56 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5f_A 47 445 + 399 Gaps:21 96.04 404 34.02 2e-56 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5e_B 47 445 + 399 Gaps:21 96.04 404 34.02 2e-56 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5e_A 47 445 + 399 Gaps:21 96.04 404 34.02 2e-56 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_uniprot_sprot sp|Q9SGU9|MGL_ARATH 11 445 + 435 Gaps:4 97.73 441 75.87 0.0 Methionine gamma-lyase OS Arabidopsis thaliana GN MGL PE 1 SV 1
blastp_uniprot_sprot sp|P13254|MEGL_PSEPU 60 442 + 383 Gaps:23 93.47 398 37.90 1e-50 Methionine gamma-lyase OS Pseudomonas putida GN mdeA PE 1 SV 2
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 97 426 + 330 Gaps:18 84.43 379 36.88 1e-48 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|Q83A83|METC_COXBU 97 426 + 330 Gaps:15 83.46 387 33.13 6e-46 Cystathionine beta-lyase OS Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 61 444 + 384 Gaps:22 97.37 380 33.24 6e-44 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 61 444 + 384 Gaps:22 97.37 380 33.24 6e-44 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1
blastp_uniprot_sprot sp|P55217|METB_ARATH 97 426 + 330 Gaps:18 57.19 563 34.47 8e-44 Cystathionine gamma-synthase chloroplastic OS Arabidopsis thaliana GN CGS1 PE 2 SV 3
blastp_uniprot_sprot sp|Q1M0P5|METB_HELPX 61 438 + 378 Gaps:25 97.63 380 32.61 2e-43 Cystathionine gamma-synthase OS Helicobacter pylori GN metB PE 1 SV 1
blastp_uniprot_sprot sp|O31632|METC_BACSU 97 445 + 349 Gaps:23 86.67 390 34.32 6e-43 Cystathionine beta-lyase MetC OS Bacillus subtilis (strain 168) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P56069|METB_HELPY 61 438 + 378 Gaps:25 97.63 380 32.08 3e-42 Cystathionine gamma-synthase OS Helicobacter pylori (strain ATCC 700392 / 26695) GN metB PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 32 446 415 PIRSF001434 none none IPR000277
Pfam 59 426 368 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277
Gene3D 53 276 224 G3DSA:3.40.640.10 none none IPR015421
Gene3D 307 427 121 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 57 448 392 PTHR11808 none none IPR000277
PANTHER 57 448 392 PTHR11808:SF15 none none none
SUPERFAMILY 58 442 385 SSF53383 none none IPR015424

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting