Protein : Qrob_P0171530.2 Q. robur
Protein Identifier  ? Qrob_P0171530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=15) 2.7.7.49 - RNA-directed DNA polymerase. Code Enzyme  EC:2.7.7.49
Gene Prediction Quality  validated Protein length 

Sequence

Length: 803  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006397 mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101309387 34 802 + 769 Gaps:4 94.11 815 76.53 0.0 uncharacterized protein LOC101309387
blastp_kegg lcl|mdm:103411417 20 802 + 783 Gaps:4 95.73 820 74.78 0.0 uncharacterized LOC103411417
blastp_kegg lcl|tcc:TCM_001510 1 802 + 802 Gaps:11 100.00 801 73.66 0.0 Intron maturase isoform 1
blastp_kegg lcl|vvi:100251856 28 802 + 775 Gaps:2 53.82 1440 74.06 0.0 uncharacterized LOC100251856
blastp_kegg lcl|cit:102626231 1 802 + 802 Gaps:9 100.00 797 71.89 0.0 uncharacterized LOC102626231
blastp_kegg lcl|rcu:RCOM_0086610 87 802 + 716 Gaps:1 100.00 715 71.75 0.0 RNA binding protein putative
blastp_kegg lcl|cmo:103486008 1 802 + 802 Gaps:11 100.00 801 66.92 0.0 uncharacterized LOC103486008
blastp_kegg lcl|gmx:100784683 43 802 + 760 Gaps:13 95.36 798 68.46 0.0 uncharacterized LOC100784683
blastp_kegg lcl|sot:102590710 63 801 + 739 Gaps:4 88.16 836 66.89 0.0 uncharacterized LOC102590710
blastp_kegg lcl|sly:101244110 63 801 + 739 Gaps:4 88.16 836 66.62 0.0 uncharacterized LOC101244110
blastp_uniprot_sprot sp|P0A3U1|LTRA_LACLM 138 444 + 307 Gaps:36 53.92 599 28.79 2e-24 Group II intron-encoded protein LtrA OS Lactococcus lactis subsp. cremoris (strain MG1363) GN ltrA PE 1 SV 1
blastp_uniprot_sprot sp|P0A3U0|LTRA_LACLC 138 444 + 307 Gaps:36 53.92 599 28.79 2e-24 Group II intron-encoded protein LtrA OS Lactococcus lactis subsp. cremoris GN ltrA PE 1 SV 1
blastp_uniprot_sprot sp|P03876|AI2M_YEAST 161 425 + 265 Gaps:38 33.14 854 25.80 2e-19 Putative COX1/OXI3 intron 2 protein OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN aI2 PE 1 SV 2
blastp_uniprot_sprot sp|P38478|YMF40_MARPO 118 439 + 322 Gaps:39 68.33 502 26.24 1e-17 Uncharacterized mitochondrial protein ymf40 OS Marchantia polymorpha GN YMF40 PE 4 SV 1
blastp_uniprot_sprot sp|B1N1A3|NICA_PSEPU 168 425 + 258 Gaps:39 46.76 618 27.68 3e-14 Putative nicotine oxidoreductase OS Pseudomonas putida GN nicA PE 4 SV 1
blastp_uniprot_sprot sp|Q47688|YKFC_ECOLI 109 429 + 321 Gaps:36 85.90 376 24.77 6e-14 Putative uncharacterized protein YkfC OS Escherichia coli (strain K12) GN ykfC PE 5 SV 2
blastp_uniprot_sprot sp|P03875|AI1M_YEAST 117 422 + 306 Gaps:41 38.49 834 25.86 4e-13 Putative COX1/OXI3 intron 1 protein OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN aI1 PE 1 SV 2
blastp_uniprot_sprot sp|P05511|YMC6_SCHPO 111 379 + 269 Gaps:26 35.81 807 25.95 6e-13 Uncharacterized 91 kDa protein in cob intron OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPMIT.06 PE 4 SV 4
rpsblast_cdd gnl|CDD|73157 167 424 + 258 Gaps:36 99.12 226 30.36 1e-31 cd01651 RT_G2_intron RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements which lack long terminal repeats (LTRs)..
rpsblast_cdd gnl|CDD|200982 181 424 + 244 Gaps:63 94.33 194 27.87 1e-08 pfam00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase). A reverse transcriptase gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. Reverse transcriptases occur in a variety of mobile elements including retrotransposons retroviruses group II introns bacterial msDNAs hepadnaviruses and caulimoviruses.
rpsblast_cdd gnl|CDD|110356 578 680 + 103 none 72.54 142 29.13 1e-08 pfam01348 Intron_maturas2 Type II intron maturase. Group II introns use intron-encoded reverse transcriptase maturase and DNA endonuclease activities for site-specific insertion into DNA. Although this type of intron is self splicing in vitro they require a maturase protein for splicing in vivo. It has been shown that a specific region of the aI2 intron is needed for the maturase function. This region was found to be conserved in group II introns and called domain X.
rpsblast_kog gnl|CDD|39965 93 422 + 330 Gaps:31 43.09 796 23.03 6e-17 KOG4768 KOG4768 KOG4768 Mitochondrial mRNA maturase [RNA processing and modification].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 3 10 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 580 699 120 PF01348 none Type II intron maturase IPR024937
Pfam 178 422 245 PF00078 none Reverse transcriptase (RNA-dependent DNA polymerase) IPR000477
Phobius 11 14 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 15 802 788 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 14 14 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 178 318 141 SSF56672 none none none
SUPERFAMILY 359 427 69 SSF56672 none none none

0 Localization

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Secretory pathway 5 0.453 0.079 NON-PLANT 16