Protein : Qrob_P0170590.2 Q. robur
Protein Identifier  ? Qrob_P0170590.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.7.7.1 - Ferredoxin--nitrite reductase. Code Enzyme  EC:1.7.7.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 582  
Kegg Orthology  K00366
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003315mg 2 581 + 580 Gaps:5 99.66 585 83.88 0.0 hypothetical protein
blastp_kegg lcl|pmum:103335269 2 581 + 580 Gaps:5 99.66 585 83.53 0.0 ferredoxin--nitrite reductase chloroplastic
blastp_kegg lcl|mdm:103436487 3 581 + 579 Gaps:7 99.49 585 82.65 0.0 ferredoxin--nitrite reductase chloroplastic
blastp_kegg lcl|pxb:103937987 3 581 + 579 Gaps:7 99.49 585 82.13 0.0 ferredoxin--nitrite reductase chloroplastic
blastp_kegg lcl|pop:POPTR_0004s14810g 1 581 + 581 Gaps:9 100.00 588 80.95 0.0 Ferredoxin--nitrite reductase family protein
blastp_kegg lcl|rcu:RCOM_0813440 1 581 + 581 Gaps:8 100.00 587 80.58 0.0 Ferredoxin--nitrite reductase chloroplast precursor putative (EC:1.7.7.1)
blastp_kegg lcl|mtr:MTR_4g086020 1 581 + 581 Gaps:3 100.00 582 80.76 0.0 Ferredoxin-nitrite reductase
blastp_kegg lcl|fve:101293380 35 581 + 547 Gaps:1 93.81 582 84.62 0.0 ferredoxin--nitrite reductase chloroplastic-like
blastp_kegg lcl|cam:101501715 1 581 + 581 Gaps:3 100.00 582 80.58 0.0 ferredoxin--nitrite reductase chloroplastic-like
blastp_kegg lcl|sly:778325 1 581 + 581 Gaps:14 100.00 587 79.22 0.0 nii1 nitrite reductase
blastp_pdb 3b0h_B 15 581 + 567 Gaps:2 96.09 588 79.65 0.0 mol:protein length:588 Nitrite reductase
blastp_pdb 3b0h_A 15 581 + 567 Gaps:2 96.09 588 79.65 0.0 mol:protein length:588 Nitrite reductase
blastp_pdb 2akj_A 27 580 + 554 Gaps:2 91.12 608 79.06 0.0 mol:protein length:608 Ferredoxin--nitrite reductase chloroplast
blastp_pdb 3vkt_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3vks_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3vkr_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3vkq_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3vkp_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3b0g_A 12 581 + 570 Gaps:10 94.75 591 81.07 0.0 mol:protein length:591 Nitrite reductase
blastp_pdb 3b0n_A 12 574 + 563 Gaps:10 94.69 584 80.83 0.0 mol:protein length:584 Nitrite reductase
blastp_uniprot_sprot sp|P38500|NIR_BETPN 1 581 + 581 Gaps:6 100.00 583 85.76 0.0 Ferredoxin--nitrite reductase chloroplastic OS Betula pendula GN NIR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39161|NIR_ARATH 1 581 + 581 Gaps:7 100.00 586 76.45 0.0 Ferredoxin--nitrite reductase chloroplastic OS Arabidopsis thaliana GN NIR1 PE 1 SV 1
blastp_uniprot_sprot sp|P05314|NIR_SPIOL 27 580 + 554 Gaps:2 93.27 594 79.06 0.0 Ferredoxin--nitrite reductase chloroplastic OS Spinacia oleracea GN NIR PE 1 SV 1
blastp_uniprot_sprot sp|P17847|NIR_MAIZE 35 581 + 547 Gaps:3 96.31 569 76.64 0.0 Ferredoxin--nitrite reductase chloroplastic (Fragment) OS Zea mays GN NIR PE 2 SV 1
blastp_uniprot_sprot sp|Q42997|NIR_ORYSJ 31 572 + 542 Gaps:3 90.77 596 75.79 0.0 Ferredoxin--nitrite reductase chloroplastic OS Oryza sativa subsp. japonica GN Os01g0357100 PE 2 SV 1
blastp_uniprot_sprot sp|P39661|NIR_SYNE7 59 574 + 516 Gaps:16 98.05 512 52.59 5e-176 Ferredoxin--nitrite reductase OS Synechococcus elongatus (strain PCC 7942) GN nirA PE 3 SV 1
blastp_uniprot_sprot sp|Q51879|NIR_PHOLA 61 571 + 511 Gaps:16 97.45 510 49.90 2e-168 Ferredoxin--nitrite reductase OS Phormidium laminosum GN nirA PE 3 SV 1
blastp_uniprot_sprot sp|Q73YC1|SIR1_MYCPA 37 545 + 509 Gaps:49 91.53 555 31.69 3e-59 Sulfite reductase [ferredoxin] 1 OS Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN sir1 PE 3 SV 1
blastp_uniprot_sprot sp|P71753|SIR_MYCTU 37 580 + 544 Gaps:48 97.30 555 30.74 3e-57 Sulfite reductase [ferredoxin] OS Mycobacterium tuberculosis GN sir PE 1 SV 2
blastp_uniprot_sprot sp|Q7TYP6|SIR_MYCBO 37 580 + 544 Gaps:48 97.30 555 30.74 3e-57 Sulfite reductase [ferredoxin] OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN sir PE 3 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 368 437 70 G3DSA:3.90.480.10 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" none IPR005117
Gene3D 121 190 70 G3DSA:3.90.480.10 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" none IPR005117
SUPERFAMILY 454 565 112 SSF56014 none none none
SUPERFAMILY 329 465 137 SSF55124 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" none IPR005117
Gene3D 454 565 112 G3DSA:3.30.413.10 none none none
SUPERFAMILY 193 351 159 SSF56014 none none none
ProSitePatterns 498 514 17 PS00365 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. IPR006066
PANTHER 18 581 564 PTHR32439:SF2 none none none
SUPERFAMILY 40 192 153 SSF55124 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" none IPR005117
Pfam 375 438 64 PF03460 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Nitrite/Sulfite reductase ferredoxin-like half domain IPR005117
Pfam 121 184 64 PF03460 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Nitrite/Sulfite reductase ferredoxin-like half domain IPR005117
Gene3D 193 356 164 G3DSA:3.30.413.10 none none none
Pfam 457 569 113 PF01077 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Nitrite and sulphite reductase 4Fe-4S domain IPR006067
Pfam 193 351 159 PF01077 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Nitrite and sulphite reductase 4Fe-4S domain IPR006067
PANTHER 18 581 564 PTHR32439 none none none
PRINTS 454 472 19 PR00397 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Sirohaem Fe-binding site signature IPR006066
PRINTS 498 516 19 PR00397 "KEGG:00920+1.8.1.2","MetaCyc:PWY-6683","UniPathway:UPA00140" Sirohaem Fe-binding site signature IPR006066

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Mitochondrion 2 0.041 0.830 NON-PLANT 26