Protein : Qrob_P0166710.2 Q. robur
Protein Identifier  ? Qrob_P0166710.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K15177 - RNA polymerase-associated protein LEO1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 181  
Kegg Orthology  K15177
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006368 transcription elongation from RNA polymerase II promoter The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.
GO:0016570 histone modification The covalent alteration of one or more amino acid residues within a histone protein.
GO:0016593 Cdc73/Paf1 complex A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338589 14 179 + 166 Gaps:17 28.96 618 75.98 8e-70 RNA polymerase-associated protein LEO1
blastp_kegg lcl|mdm:103424559 14 179 + 166 Gaps:15 29.62 611 70.17 2e-66 RNA polymerase-associated protein LEO1-like
blastp_kegg lcl|pop:POPTR_0012s06710g 11 180 + 170 Gaps:18 29.35 620 71.43 7e-66 POPTRDRAFT_569930 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G192800g 14 166 + 153 Gaps:15 26.29 639 72.02 1e-63 hypothetical protein
blastp_kegg lcl|pxb:103931353 14 179 + 166 Gaps:19 28.87 613 70.06 3e-63 RNA polymerase-associated protein LEO1-like
blastp_kegg lcl|gmx:100810965 14 163 + 150 Gaps:15 26.07 633 71.52 3e-62 RNA polymerase-associated protein LEO1-like
blastp_kegg lcl|gmx:100791454 14 163 + 150 Gaps:15 26.23 629 70.91 2e-61 RNA polymerase-associated protein LEO1-like
blastp_kegg lcl|cic:CICLE_v10019267mg 14 180 + 167 Gaps:16 28.68 638 74.32 4e-61 hypothetical protein
blastp_kegg lcl|vvi:100248444 14 180 + 167 Gaps:17 28.89 623 75.00 9e-60 uncharacterized LOC100248444
blastp_kegg lcl|vvi:100260418 11 180 + 170 Gaps:17 47.29 387 71.58 1e-59 RNA polymerase-associated protein LEO1-like

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 13 72 60 PF04004 none Leo1-like protein IPR007149

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting