Protein : Qrob_P0160680.2 Q. robur
Protein Identifier  ? Qrob_P0160680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10909//PTHR10909:SF187 - ELECTRON TRANSPORT OXIDOREDUCTASE // SUBFAMILY NOT NAMED Code Enzyme  EC:1.3.3.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 678  
Kegg Orthology  K00232
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003995 acyl-CoA dehydrogenase activity Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0005777 peroxisome A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.
GO:0006631 fatty acid metabolic process The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
GO:0003997 acyl-CoA oxidase activity Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.
GO:0006635 fatty acid beta-oxidation A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103405633 4 677 + 674 Gaps:5 99.26 674 81.02 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|tcc:TCM_008258 7 677 + 671 Gaps:2 96.96 690 79.82 0.0 Acyl-CoA oxidase 3 isoform 1
blastp_kegg lcl|pxb:103945444 4 677 + 674 Gaps:5 99.26 674 80.87 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|fve:101303139 4 677 + 674 Gaps:7 99.26 674 80.72 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|vvi:100257524 4 677 + 674 Gaps:5 97.11 691 80.33 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|cic:CICLE_v10014502mg 8 677 + 670 Gaps:6 98.96 671 79.82 0.0 hypothetical protein
blastp_kegg lcl|cit:102619168 8 677 + 670 Gaps:6 98.96 671 79.67 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|pmum:103342967 4 677 + 674 Gaps:16 99.40 662 81.61 0.0 acyl-coenzyme A oxidase 3 peroxisomal-like
blastp_kegg lcl|pop:POPTR_0019s12240g 6 677 + 672 Gaps:6 98.24 680 79.19 0.0 POPTRDRAFT_780712 acyl-CoA oxidase family protein
blastp_kegg lcl|eus:EUTSA_v10006988mg 7 677 + 671 Gaps:3 98.96 675 76.65 0.0 hypothetical protein
blastp_pdb 2fon_C 154 674 + 521 Gaps:43 77.01 683 32.89 4e-71 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 2fon_B 154 674 + 521 Gaps:43 77.01 683 32.89 4e-71 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 2fon_A 154 674 + 521 Gaps:43 77.01 683 32.89 4e-71 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 1w07_B 154 674 + 521 Gaps:45 79.82 659 32.70 9e-68 mol:protein length:659 ACYL-COA OXIDASE
blastp_pdb 1w07_A 154 674 + 521 Gaps:45 79.82 659 32.70 9e-68 mol:protein length:659 ACYL-COA OXIDASE
blastp_pdb 2ddh_A 152 677 + 526 Gaps:49 80.64 661 31.14 2e-67 mol:protein length:661 Acyl-CoA oxidase
blastp_pdb 1is2_B 152 677 + 526 Gaps:49 80.64 661 31.14 2e-67 mol:protein length:661 acyl-CoA oxidase
blastp_pdb 1is2_A 152 677 + 526 Gaps:49 80.64 661 31.14 2e-67 mol:protein length:661 acyl-CoA oxidase
blastp_pdb 1jqi_B 147 366 + 220 Gaps:30 48.97 388 28.42 1e-13 mol:protein length:388 short chain acyl-CoA dehydrogenase
blastp_pdb 1jqi_A 147 366 + 220 Gaps:30 48.97 388 28.42 1e-13 mol:protein length:388 short chain acyl-CoA dehydrogenase
blastp_uniprot_sprot sp|P0CZ23|ACOX3_ARATH 7 677 + 671 Gaps:3 98.96 675 76.35 0.0 Acyl-coenzyme A oxidase 3 peroxisomal OS Arabidopsis thaliana GN ACX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LMI7|ACO32_ARATH 7 677 + 671 Gaps:3 98.96 675 74.10 0.0 Putative acyl-coenzyme A oxidase 3.2 peroxisomal OS Arabidopsis thaliana GN ACX3.2 PE 3 SV 1
blastp_uniprot_sprot sp|O64894|ACOX2_CUCMA 99 675 + 577 Gaps:42 85.36 690 40.07 2e-118 Acyl-coenzyme A oxidase peroxisomal OS Cucurbita maxima GN Acx PE 1 SV 1
blastp_uniprot_sprot sp|O65201|ACOX2_ARATH 7 666 + 660 Gaps:65 94.94 692 38.36 1e-116 Acyl-coenzyme A oxidase 2 peroxisomal OS Arabidopsis thaliana GN ACX2 PE 1 SV 2
blastp_uniprot_sprot sp|O74936|ACOX3_YARLI 78 665 + 588 Gaps:43 84.71 700 35.75 1e-97 Acyl-coenzyme A oxidase 3 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN POX3 PE 1 SV 1
blastp_uniprot_sprot sp|O15254|ACOX3_HUMAN 92 677 + 586 Gaps:41 86.71 700 36.24 7e-95 Peroxisomal acyl-coenzyme A oxidase 3 OS Homo sapiens GN ACOX3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9DBS4|ACOXL_MOUSE 121 657 + 537 Gaps:27 86.08 632 36.03 8e-94 Acyl-coenzyme A oxidase-like protein OS Mus musculus GN Acoxl PE 2 SV 1
blastp_uniprot_sprot sp|Q5RAU0|ACOX3_PONAB 92 677 + 586 Gaps:41 86.71 700 35.58 6e-93 Peroxisomal acyl-coenzyme A oxidase 3 OS Pongo abelii GN ACOX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9NUZ1|ACOXL_HUMAN 103 635 + 533 Gaps:24 99.27 547 34.99 8e-92 Acyl-coenzyme A oxidase-like protein OS Homo sapiens GN ACOXL PE 2 SV 3
blastp_uniprot_sprot sp|Q9EPL9|ACOX3_MOUSE 49 677 + 629 Gaps:83 91.71 700 33.80 2e-91 Peroxisomal acyl-coenzyme A oxidase 3 OS Mus musculus GN Acox3 PE 2 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 337 493 157 G3DSA:1.20.140.10 none none none
Gene3D 526 655 130 G3DSA:1.20.140.10 none none none
Pfam 187 243 57 PF02770 none Acyl-CoA dehydrogenase, middle domain IPR006091
PANTHER 49 538 490 PTHR10909 none none none
SUPERFAMILY 524 663 140 SSF47203 none none IPR009075
Pfam 328 485 158 PF00441 none Acyl-CoA dehydrogenase, C-terminal domain IPR009075
SUPERFAMILY 326 499 174 SSF47203 none none IPR009075
Pfam 524 661 138 PF01756 "KEGG:00071+1.3.3.6","KEGG:00592+1.3.3.6","MetaCyc:PWY-5136","MetaCyc:PWY-6837","MetaCyc:PWY-6920","MetaCyc:PWY-7007","MetaCyc:PWY-7288","MetaCyc:PWY-7291","MetaCyc:PWY-7337","MetaCyc:PWY-7338","MetaCyc:PWY-7340","MetaCyc:PWY-735","MetaCyc:PWY-7606" Acyl-CoA oxidase IPR002655
PANTHER 49 538 490 PTHR10909:SF187 none none none
Gene3D 186 316 131 G3DSA:2.40.110.10 none none IPR006091
PIRSF 31 677 647 PIRSF000168 "KEGG:00071+1.3.3.6","KEGG:00592+1.3.3.6","MetaCyc:PWY-5136","MetaCyc:PWY-6837","MetaCyc:PWY-6920","MetaCyc:PWY-7007","MetaCyc:PWY-7288","MetaCyc:PWY-7291","MetaCyc:PWY-7337","MetaCyc:PWY-7338","MetaCyc:PWY-7340","MetaCyc:PWY-735","MetaCyc:PWY-7606" none IPR012258
SUPERFAMILY 95 317 223 SSF56645 none none IPR009100

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting