Protein : Qrob_P0160320.2 Q. robur
Protein Identifier  ? Qrob_P0160320.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR12847//PTHR12847:SF4 - ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 184  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006897 endocytosis A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100799391 7 179 + 173 none 60.07 288 71.10 2e-68 uncharacterized LOC100799391
blastp_kegg lcl|pvu:PHAVU_005G096000g 7 179 + 173 none 60.07 288 69.36 2e-67 hypothetical protein
blastp_kegg lcl|mdm:103444420 9 179 + 171 Gaps:4 59.64 280 74.85 3e-65 uncharacterized protein At1g03900-like
blastp_kegg lcl|cam:101503323 7 178 + 172 Gaps:5 59.01 283 70.06 6e-64 uncharacterized LOC101503323
blastp_kegg lcl|pxb:103945432 6 178 + 173 Gaps:5 60.50 281 72.94 6e-64 uncharacterized protein At1g03900-like
blastp_kegg lcl|gmx:100813301 7 179 + 173 Gaps:2 59.79 286 70.18 7e-64 adaptin ear-binding coat-associated protein 2-like
blastp_kegg lcl|pxb:103945430 9 178 + 170 Gaps:5 59.43 281 74.85 2e-63 uncharacterized protein At1g03900-like
blastp_kegg lcl|vvi:100245387 7 179 + 173 Gaps:5 34.47 499 76.16 6e-63 uncharacterized LOC100245387
blastp_kegg lcl|cic:CICLE_v10016120mg 7 179 + 173 Gaps:2 58.84 294 69.36 7e-63 hypothetical protein
blastp_kegg lcl|pxb:103947978 9 178 + 170 Gaps:4 60.36 275 73.49 7e-63 uncharacterized protein At1g03900-like
blastp_uniprot_sprot sp|Q681Q7|Y1390_ARATH 9 74 + 66 Gaps:5 26.10 272 45.07 5e-12 Uncharacterized protein At1g03900 OS Arabidopsis thaliana GN At1g03900 PE 2 SV 1
blastp_uniprot_sprot sp|Q5E9Q4|NECP2_BOVIN 9 77 + 69 none 25.94 266 39.13 2e-10 Adaptin ear-binding coat-associated protein 2 OS Bos taurus GN NECAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9NVZ3|NECP2_HUMAN 9 77 + 69 none 26.24 263 36.23 1e-09 Adaptin ear-binding coat-associated protein 2 OS Homo sapiens GN NECAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9D1J1|NECP2_MOUSE 9 77 + 69 none 25.94 266 34.78 2e-09 Adaptin ear-binding coat-associated protein 2 OS Mus musculus GN Necap2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R630|NECP1_PONAB 9 85 + 77 Gaps:2 28.73 275 32.91 4e-09 Adaptin ear-binding coat-associated protein 1 OS Pongo abelii GN NECAP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8NC96|NECP1_HUMAN 9 180 + 172 Gaps:28 58.91 275 30.86 5e-09 Adaptin ear-binding coat-associated protein 1 OS Homo sapiens GN NECAP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q3T093|NECP1_BOVIN 9 85 + 77 Gaps:2 28.73 275 32.91 1e-08 Adaptin ear-binding coat-associated protein 1 OS Bos taurus GN NECAP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6P756|NECP2_RAT 9 77 + 69 none 26.24 263 31.88 2e-08 Adaptin ear-binding coat-associated protein 2 OS Rattus norvegicus GN Necap2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9CR95|NECP1_MOUSE 9 73 + 65 none 23.64 275 33.85 2e-08 Adaptin ear-binding coat-associated protein 1 OS Mus musculus GN Necap1 PE 1 SV 2
blastp_uniprot_sprot sp|P69682|NECP1_RAT 9 73 + 65 none 23.47 277 33.85 4e-08 Adaptin ear-binding coat-associated protein 1 OS Rattus norvegicus GN Necap1 PE 1 SV 1
rpsblast_cdd gnl|CDD|191897 12 74 + 63 none 39.87 158 38.10 5e-15 pfam07933 DUF1681 Protein of unknown function (DUF1681). This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function.
rpsblast_kog gnl|CDD|37711 9 175 + 167 Gaps:25 61.66 253 37.18 2e-31 KOG2500 KOG2500 KOG2500 Uncharacterized conserved protein [Function unknown].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 175 167 PTHR12847 none none none
PANTHER 9 175 167 PTHR12847:SF4 none none none
Gene3D 11 42 32 G3DSA:2.30.29.30 none none IPR011993
Pfam 12 74 63 PF07933 none Protein of unknown function (DUF1681) IPR012466
SUPERFAMILY 10 42 33 SSF50729 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 94   Mitochondrion 3 0.093 0.667 NON-PLANT 94