Protein : Qrob_P0159700.2 Q. robur
Protein Identifier  ? Qrob_P0159700.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR31352:SF3 - INACTIVE BETA-AMYLASE 9 (PTHR31352:SF3) Alias (in v1)  Qrob_P0799400.1
Code Enzyme  EC:3.2.1.2 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 537  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0000272 polysaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
GO:0016161 beta-amylase activity Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004116mg 1 536 + 536 Gaps:13 100.00 529 75.43 0.0 hypothetical protein
blastp_kegg lcl|pmum:103322923 1 536 + 536 Gaps:13 99.81 530 74.86 0.0 inactive beta-amylase 9
blastp_kegg lcl|fve:101294256 1 536 + 536 Gaps:12 100.00 530 72.45 0.0 inactive beta-amylase 9-like
blastp_kegg lcl|cit:102577946 1 536 + 536 Gaps:17 100.00 543 72.93 0.0 SD3 putative beta-amylase
blastp_kegg lcl|cic:CICLE_v10004689mg 1 536 + 536 Gaps:17 100.00 543 72.74 0.0 hypothetical protein
blastp_kegg lcl|pxb:103958554 1 536 + 536 Gaps:14 100.00 530 73.58 0.0 inactive beta-amylase 9-like
blastp_kegg lcl|mdm:103414626 1 536 + 536 Gaps:13 100.00 529 74.10 0.0 inactive beta-amylase 9-like
blastp_kegg lcl|mdm:103452992 1 536 + 536 Gaps:13 100.00 529 74.10 0.0 inactive beta-amylase 9
blastp_kegg lcl|vvi:100263193 1 536 + 536 Gaps:15 100.00 541 70.43 0.0 inactive beta-amylase 9-like
blastp_kegg lcl|mdm:103403788 1 536 + 536 Gaps:14 100.00 530 73.02 0.0 inactive beta-amylase 9-like
blastp_pdb 1b1y_A 84 503 + 420 Gaps:19 86.20 500 36.43 3e-88 mol:protein length:500 PROTEIN (BETA-AMYLASE)
blastp_pdb 1fa2_A 84 503 + 420 Gaps:18 86.75 498 35.42 2e-87 mol:protein length:498 BETA-AMYLASE
blastp_pdb 2xgi_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 2xgb_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 2xg9_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 2xfy_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 2xfr_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 2xff_A 84 503 + 420 Gaps:19 80.56 535 35.73 9e-86 mol:protein length:535 BETA-AMYLASE
blastp_pdb 1v3i_A 84 530 + 447 Gaps:20 92.32 495 33.92 2e-85 mol:protein length:495 Beta-amylase
blastp_pdb 1q6d_A 84 530 + 447 Gaps:20 92.32 495 33.70 4e-85 mol:protein length:495 beta-amylase
blastp_uniprot_sprot sp|Q8VYW2|BAM9_ARATH 1 527 + 527 Gaps:21 98.13 536 62.93 0.0 Inactive beta-amylase 9 OS Arabidopsis thaliana GN BAM9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIR6|BAM1_ARATH 84 504 + 421 Gaps:14 75.65 575 41.61 2e-109 Beta-amylase 1 chloroplastic OS Arabidopsis thaliana GN BAM1 PE 1 SV 1
blastp_uniprot_sprot sp|O23553|BAM3_ARATH 78 521 + 444 Gaps:9 81.93 548 39.64 1e-107 Beta-amylase 3 chloroplastic OS Arabidopsis thaliana GN BAM3 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FM68|BAM4_ARATH 78 503 + 426 Gaps:17 83.43 531 38.60 3e-103 Inactive beta-amylase 4 chloroplastic OS Arabidopsis thaliana GN BAM4 PE 2 SV 1
blastp_uniprot_sprot sp|O65258|BAM2_ARATH 84 514 + 431 Gaps:24 80.26 542 38.39 2e-90 Beta-amylase 2 chloroplastic OS Arabidopsis thaliana GN BAM2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8L762|BAM6_ARATH 24 525 + 502 Gaps:31 91.33 577 33.59 3e-90 Beta-amylase 6 OS Arabidopsis thaliana GN BAM6 PE 2 SV 1
blastp_uniprot_sprot sp|O65015|AMYB_TRIRP 84 530 + 447 Gaps:20 92.14 496 35.89 9e-90 Beta-amylase OS Trifolium repens GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|O64407|AMYB_VIGUN 84 530 + 447 Gaps:20 92.14 496 35.45 2e-89 Beta-amylase OS Vigna unguiculata GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|P55005|AMYB_MAIZE 84 503 + 420 Gaps:25 88.32 488 36.66 1e-87 Beta-amylase OS Zea mays GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|O22585|AMYB_MEDSA 84 530 + 447 Gaps:20 92.14 496 35.01 3e-87 Beta-amylase OS Medicago sativa GN BMY1 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 139 157 19 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 248 270 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 360 376 17 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 324 343 20 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 118 132 15 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 377 388 12 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 395 418 24 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 432 454 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
Pfam 87 487 401 PF01373 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Glycosyl hydrolase family 14 IPR001554
PANTHER 1 511 511 PTHR31352 none none none
SUPERFAMILY 82 517 436 SSF51445 none none IPR017853
Gene3D 79 528 450 G3DSA:3.20.20.80 none none IPR013781
PANTHER 1 511 511 PTHR31352:SF3 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting