Protein : Qrob_P0159590.2 Q. robur
Protein Identifier  ? Qrob_P0159590.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR21319//PTHR21319:SF5 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED (PTHR21319:SF5) Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 268  
Kegg Orthology  K10144
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103958561 1 267 + 267 none 100.00 267 89.89 4e-180 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|pmum:103322930 1 267 + 267 none 100.00 267 88.76 3e-179 RING finger and CHY zinc finger domain-containing protein 1
blastp_kegg lcl|cit:102629227 1 267 + 267 none 100.00 267 87.64 2e-178 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|fve:101296367 1 267 + 267 none 100.00 267 88.01 1e-177 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|pxb:103937583 1 267 + 267 none 100.00 267 88.39 8e-177 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|pxb:103937573 1 267 + 267 none 100.00 267 88.39 8e-177 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|pxb:103943621 1 267 + 267 none 100.00 267 88.39 8e-177 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|mdm:103403783 1 267 + 267 none 100.00 267 87.64 4e-176 RING finger and CHY zinc finger domain-containing protein 1
blastp_kegg lcl|mdm:103452984 1 267 + 267 none 100.00 267 87.27 1e-175 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_kegg lcl|mdm:103414633 1 266 + 266 none 79.88 333 87.22 3e-175 RING finger and CHY zinc finger domain-containing protein 1-like
blastp_pdb 2dkt_A 17 148 + 132 Gaps:10 85.31 143 47.54 3e-32 mol:protein length:143 RING finger and CHY zinc finger domain-contai
blastp_pdb 2k2c_A 1 145 + 145 Gaps:12 100.00 137 42.34 3e-31 mol:protein length:137 RING finger and CHY zinc finger domain-contai
blastp_pdb 2k2d_A 198 257 + 60 none 75.95 79 53.33 4e-17 mol:protein length:79 RING finger and CHY zinc finger domain-contai
blastp_uniprot_sprot sp|Q96PM5|ZN363_HUMAN 1 257 + 257 Gaps:13 95.02 261 45.16 2e-71 RING finger and CHY zinc finger domain-containing protein 1 OS Homo sapiens GN RCHY1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9CR50|ZN363_MOUSE 10 266 + 257 Gaps:11 94.25 261 45.12 3e-71 RING finger and CHY zinc finger domain-containing protein 1 OS Mus musculus GN Rchy1 PE 1 SV 1
blastp_uniprot_sprot sp|O14099|YERG_SCHPO 17 257 + 241 Gaps:11 55.06 425 43.16 2e-58 Uncharacterized RING finger protein C2F3.16 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC2F3.16 PE 4 SV 1
rpsblast_cdd gnl|CDD|203259 18 100 + 83 Gaps:11 100.00 74 54.05 3e-16 pfam05495 zf-CHY CHY zinc finger. This family of domains are likely to bind to zinc ions. They contain many conserved cysteine and histidine residues. We have named this domain after the N-terminal motif CXHY. This domain can be found in isolation in some proteins but is also often associated with pfam00097. One of the proteins in this family is a mitochondrial intermembrane space protein called Hot13. This protein is involved in the assembly of small TIM complexes.
rpsblast_kog gnl|CDD|37151 6 267 + 262 Gaps:11 90.94 276 49.80 2e-64 KOG1940 KOG1940 KOG1940 Zn-finger protein [General function prediction only].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 11 86 76 PS51266 none Zinc finger CHY-type profile. IPR008913
Pfam 18 100 83 PF05495 none CHY zinc finger IPR008913
PANTHER 7 266 260 PTHR21319:SF5 none none IPR031109
ProSiteProfiles 153 196 44 PS50089 none Zinc finger RING-type profile. IPR001841
Pfam 199 258 60 PF14599 none Zinc-ribbon none
SMART 153 195 43 SM00184 none Ring finger IPR001841
Gene3D 225 263 39 G3DSA:2.20.28.10 none none IPR004039
Pfam 152 195 44 PF13639 none Ring finger domain IPR001841
SUPERFAMILY 152 203 52 SSF57850 none none none
PANTHER 7 266 260 PTHR21319 none none none
ProSiteProfiles 88 152 65 PS51270 none Zinc finger CTCHY-type profile. IPR017921
SUPERFAMILY 89 146 58 SSF161245 none none none
SUPERFAMILY 15 87 73 SSF161219 none none none
Gene3D 151 212 62 G3DSA:3.30.40.10 none none IPR013083

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting