Protein : Qrob_P0157640.2 Q. robur
Protein Identifier  ? Qrob_P0157640.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 43  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mus:103983621 1 37 + 37 none 33.04 112 94.59 1e-17 cytochrome c-like
blastp_kegg lcl|mus:103988136 1 37 + 37 none 33.04 112 94.59 1e-17 cytochrome c
blastp_kegg lcl|obr:102709645 1 37 + 37 none 33.04 112 94.59 2e-17 cytochrome c-like
blastp_kegg lcl|dosa:Os05t0420600-01 1 37 + 37 none 33.04 112 94.59 2e-17 Os05g0420600 CC1 CYTOCHROME_C_1 Cytochrome c.
blastp_kegg lcl|osa:4338825 1 37 + 37 none 33.04 112 94.59 2e-17 Os05g0420600
blastp_kegg lcl|zma:100383938 1 37 + 37 none 33.04 112 94.59 2e-17 cytochrome c
blastp_kegg lcl|bdi:100826967 1 37 + 37 none 32.74 113 94.59 2e-17 cytochrome c-like
blastp_kegg lcl|sly:101261271 1 37 + 37 none 33.04 112 91.89 4e-17 cytochrome c-like
blastp_kegg lcl|mus:103992644 1 37 + 37 none 33.04 112 91.89 4e-17 cytochrome c-like
blastp_kegg lcl|mus:103971867 1 37 + 37 none 32.74 113 91.89 5e-17 cytochrome c-like
blastp_pdb 1ccr_A 2 37 + 36 none 32.14 112 94.44 2e-18 mol:protein length:112 CYTOCHROME C
blastp_pdb 2aiu_A 10 36 + 27 none 25.71 105 66.67 5e-06 mol:protein length:105 Cytochrome c testis-specific
blastp_uniprot_sprot sp|Q0DI31|CYC_ORYSJ 1 37 + 37 none 33.04 112 94.59 6e-19 Cytochrome c OS Oryza sativa subsp. japonica GN CC-1 PE 1 SV 1
blastp_uniprot_sprot sp|A2Y4S9|CYC_ORYSI 1 37 + 37 none 33.04 112 94.59 6e-19 Cytochrome c OS Oryza sativa subsp. indica GN CC-1 PE 3 SV 1
blastp_uniprot_sprot sp|O22642|CYC_FRIAG 1 37 + 37 none 32.74 113 94.59 1e-17 Cytochrome c OS Fritillaria agrestis GN CYTC PE 3 SV 3
blastp_uniprot_sprot sp|P00056|CYC_MAIZE 2 37 + 36 none 32.43 111 91.67 2e-17 Cytochrome c OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|Q9T0G2|CYC3_ARATH 1 37 + 37 none 33.04 112 86.49 3e-17 Probable cytochrome c At4g10040 OS Arabidopsis thaliana GN At4g10040 PE 3 SV 1
blastp_uniprot_sprot sp|P00074|CYC_GINBI 2 37 + 36 none 31.86 113 88.89 4e-17 Cytochrome c OS Ginkgo biloba PE 1 SV 1
blastp_uniprot_sprot sp|P00065|CYC_ARUMA 2 37 + 36 none 32.43 111 88.89 5e-17 Cytochrome c OS Arum maculatum PE 1 SV 1
blastp_uniprot_sprot sp|P00063|CYC_ACENE 2 37 + 36 none 32.14 112 88.89 6e-17 Cytochrome c OS Acer negundo PE 1 SV 1
blastp_uniprot_sprot sp|P00061|CYC_SOLTU 2 37 + 36 none 32.43 111 88.89 7e-17 Cytochrome c OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|P00062|CYC_SAMNI 2 37 + 36 none 32.43 111 88.89 7e-17 Cytochrome c OS Sambucus nigra PE 1 SV 1

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 8 36 29 G3DSA:1.10.760.10 none none IPR009056
ProSiteProfiles 10 42 33 PS51007 none Cytochrome c family profile. IPR009056
SUPERFAMILY 6 36 31 SSF46626 none none IPR009056

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting