Protein : Qrob_P0152550.2 Q. robur
Protein Identifier  ? Qrob_P0152550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR11206:SF109 - MATE EFFLUX FAMILY PROTEIN (PTHR11206:SF109) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 485  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10004833mg 5 484 + 480 Gaps:9 99.39 492 78.73 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1582850 8 484 + 477 Gaps:1 97.34 489 80.25 0.0 multidrug resistance pump putative
blastp_kegg lcl|cit:102611434 5 484 + 480 Gaps:9 99.39 492 78.73 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|tcc:TCM_015227 1 479 + 479 Gaps:11 92.98 527 77.76 0.0 Detoxifying efflux carrier 35 isoform 1
blastp_kegg lcl|brp:103863377 2 479 + 478 Gaps:5 98.77 489 76.60 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|brp:103861583 3 474 + 472 Gaps:7 98.16 488 76.62 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|vvi:100250967 4 480 + 477 Gaps:10 99.59 489 75.15 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|sot:102600655 1 479 + 479 Gaps:13 97.23 506 73.37 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|sly:101262119 1 479 + 479 Gaps:16 98.21 504 72.73 0.0 protein TRANSPARENT TESTA 12-like
blastp_kegg lcl|fve:101310939 5 484 + 480 Gaps:3 93.97 514 72.67 0.0 protein TRANSPARENT TESTA 12-like
blastp_pdb 3mku_B 25 452 + 428 Gaps:18 95.22 460 22.37 8e-20 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 25 452 + 428 Gaps:18 95.22 460 22.37 8e-20 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 25 452 + 428 Gaps:18 95.22 460 22.37 8e-20 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 25 452 + 428 Gaps:18 95.22 460 22.37 8e-20 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 28 474 + 447 Gaps:2 88.56 507 41.20 7e-115 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 28 467 + 440 Gaps:2 92.86 476 33.48 3e-73 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 28 467 + 440 Gaps:2 92.86 476 33.03 1e-71 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 28 467 + 440 Gaps:2 92.86 476 33.03 4e-71 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 28 467 + 440 Gaps:2 92.86 476 33.26 6e-71 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 3 458 + 456 Gaps:9 97.48 477 32.90 4e-68 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 38 463 + 426 Gaps:6 91.26 469 33.18 6e-67 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 22 467 + 446 Gaps:4 92.75 483 31.47 2e-65 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 5 467 + 463 Gaps:7 98.11 477 31.20 4e-65 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|A1L1P9|S47A1_DANRE 2 466 + 465 Gaps:8 78.47 590 30.24 7e-56 Multidrug and toxin extrusion protein 1 OS Danio rerio GN slc47a1 PE 2 SV 1
rpsblast_cdd gnl|CDD|162043 38 377 + 340 Gaps:8 100.00 342 26.61 1e-45 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|30880 25 466 + 442 Gaps:10 97.58 455 24.32 5e-43 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 34 466 + 433 Gaps:23 96.05 456 23.29 3e-29 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_cdd gnl|CDD|190033 38 420 + 383 Gaps:5 100.00 161 51.55 2e-24 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|166843 58 447 + 390 Gaps:24 86.21 464 24.25 2e-07 PRK00187 PRK00187 multidrug efflux protein NorA Provisional.
rpsblast_kog gnl|CDD|36561 11 473 + 463 Gaps:2 97.89 473 38.44 1e-115 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 295 316 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 427 452 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 68 93 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 254 275 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 209 233 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 478 468 PTHR11206 none none none
Phobius 351 369 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 401 421 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 114 135 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 67 67 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 180 203 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 38 198 161 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Pfam 258 420 163 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
TIGRFAM 38 433 396 TIGR00797 "Reactome:REACT_15518","Reactome:REACT_20633" matE: MATE efflux family protein IPR002528
Phobius 328 350 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 204 208 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 169 179 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 234 253 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 317 327 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 147 168 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 478 468 PTHR11206:SF109 none none none
Phobius 422 426 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 390 400 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 453 484 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 94 113 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 370 389 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 276 294 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 136 146 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

12 Localization

Analysis Start End Length
TMHMM 179 201 22
TMHMM 55 77 22
TMHMM 147 166 19
TMHMM 114 132 18
TMHMM 286 308 22
TMHMM 372 394 22
TMHMM 87 109 22
TMHMM 430 452 22
TMHMM 328 350 22
TMHMM 211 233 22
TMHMM 401 420 19
TMHMM 254 276 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

0 Targeting