Protein : Qrob_P0152180.2 Q. robur
Protein Identifier  ? Qrob_P0152180.2 Organism . Name  Quercus robur
Score  16.6 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 406  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004562 51 389 + 339 Gaps:1 84.58 402 56.18 6e-132 Mitochondrial transcription termination factor family protein
blastp_kegg lcl|rcu:RCOM_0555350 52 389 + 338 Gaps:1 89.92 377 53.10 5e-125 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s12770g 51 388 + 338 Gaps:1 84.75 400 52.51 1e-124 POPTRDRAFT_897202 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0555360 51 389 + 339 Gaps:1 83.74 406 52.94 2e-123 hypothetical protein
blastp_kegg lcl|mdm:103443494 52 392 + 341 Gaps:3 84.86 403 54.09 1e-119 uncharacterized LOC103443494
blastp_kegg lcl|pxb:103963512 52 394 + 343 Gaps:3 84.52 407 53.49 2e-119 uncharacterized LOC103963512
blastp_kegg lcl|vvi:100263451 50 399 + 350 none 84.95 412 48.86 1e-118 uncharacterized LOC100263451
blastp_kegg lcl|vvi:100241175 19 400 + 382 Gaps:5 91.95 410 46.68 2e-117 uncharacterized LOC100241175
blastp_kegg lcl|vvi:100257975 1 401 + 401 Gaps:9 99.75 401 44.50 2e-113 uncharacterized LOC100257975
blastp_kegg lcl|pper:PRUPE_ppa022361mg 51 392 + 342 Gaps:2 89.30 383 50.88 4e-112 hypothetical protein
rpsblast_cdd gnl|CDD|202273 51 366 + 316 Gaps:47 100.00 345 39.13 7e-22 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_cdd gnl|CDD|178738 111 397 + 287 Gaps:10 58.52 487 24.21 5e-07 PLN03196 PLN03196 MOC1-like protein Provisional.
rpsblast_kog gnl|CDD|36481 3 374 + 372 Gaps:9 91.28 413 25.20 3e-34 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 104 135 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 29 67 39 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 313 347 35 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 176 207 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 281 312 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 140 171 32 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 13 398 386 PTHR13068 none none none
PANTHER 13 398 386 PTHR13068:SF15 none none none
Pfam 258 365 108 PF02536 none mTERF IPR003690
Pfam 92 277 186 PF02536 none mTERF IPR003690

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 9   Mitochondrion 1 0.103 0.916 NON-PLANT 9